LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele49g1057	ATGAAGTTTCAAAGGAGAAACTGCTTCATATTATCTCTATTTTTCATCACCCTTGATCAAGCGTGTTCTCAAACTTCTTCTGCCGATTGCATCCTTGACATTCAATCTTCTACATCCTTGAATAATAATAATCATAGCTCTGGTTGTGAATTGCACAGCTGGGGAGGGTTTATAAATAGCTGTTGTGGATTAGATTTCAACAGTTACCTTTATGCATTGGGGATTCATGCCAATGAATCTGGAAAAATATACTTGAATTCCTCAGAGCAAGAAACTTGCCTCGCATCGACGAATATTAAAGGATGTCGGGTGGAGAAGCTAAGCACCGGAGCCGATGGCTGCTCTGGCTTCTCTGCCATAGATGTTATGGACAAACTTGGAGATGAGTTGAGAAGATTAGATGAAGATTGCATGCCTTTGAGCAAGAATGGAAGAGAAAATGAGACTTGTACGGCGTGTTTAAGAAGGTGGGAGGAGATTAGCGCGATATCGGACGATAAAAAGGAGTCGGGGTCTGCAGATTTTGATGATAATCTTTGTAGGTTTGCAGTACTAATCTCACTTACAAGCATAAGACTTTATGATAGGGACTCAATTCTGGCAGTTTATGAATGCATTGGAACCTACAGCCTTTCAGCAGGTCTCTGGATATTACCTTTTGGCATAATTGGAATCATAGTCATAGGGTTTCTTACAGTATGGATCTTGCATGGACTAAGAACAAGAAGTCCTCCAACGAAACAAGAAGAGGCAGAGGATTCAAGCTCTCTTAAGATAACTATTAAGGAAGTTTATATGGCGACCAACAATCTTAATGCTTCAAATTATATTGGTCAAGGCATAGCTGGAAAAGTGTACGAAGGTATACTTTCCAACGGTCAGCATGTAGCCATCAAGCATATAGTGGGTGAAGCATACTTGGAGACATTTGTTAGGGAAGTGAGAAGCCTTTCTCGTGTTAGACATCAAAACTTAGTATCTTTGGTCGGATACTGTGACAGTGAAGGCAAAGATAAAGTTCTTTCGTGGATTCAGAGACTTAAGATTGCAGTTGATTGTTCAAGAGGTCTCATGTTTCTCCACACCTATGCAGGTGGCTGCATTATTCACCGGGACATTAAGCCATCAAACATTCTAATTGACACCAACATGCAAGCAAAGCTTTCAGACTTTGGATTGTCCAAGGTAATGGACCTCGACCAATCGTTCGTGAGCTCCGAGGTGAGAGGAACATTAGGTTACATCGATCCCGAATACCGGAAGAACCGCCATGTAAAAGCCTCGGGAGATGTCTACAGTTTTGGAATCGTATTACTGCAACTTCTTTCCGGACGGAAGGTCATCAACTTCAATCTCCAGAGACCAATGTCCCTAGATAACATGGCTAGAAATTTGACTAGAGGCGGGAATATATCAGAGTTTGCTGATCCTAAACTCAGAGGGGAGTACTCTGCAGAAGCATTTAGCCTCACACTAAAGCTCGCCGTGTCGTGTATAGGGCTTAAGCAGCAACGGCCATCGATGGAGCAAGTTCTACGTAGCCTAGAGAATGCTCTGGAAATCACATCACAAACTAAATCATTCACATCTTTCACAGTCTAA	1602	0.4201	MKFQRRNCFILSLFFITLDQACSQTSSADCILDIQSSTSLNNNNHSSGCELHSWGGFINSCCGLDFNSYLYALGIHANESGKIYLNSSEQETCLASTNIKGCRVEKLSTGADGCSGFSAIDVMDKLGDELRRLDEDCMPLSKNGRENETCTACLRRWEEISAISDDKKESGSADFDDNLCRFAVLISLTSIRLYDRDSILAVYECIGTYSLSAGLWILPFGIIGIIVIGFLTVWILHGLRTRSPPTKQEEAEDSSSLKITIKEVYMATNNLNASNYIGQGIAGKVYEGILSNGQHVAIKHIVGEAYLETFVREVRSLSRVRHQNLVSLVGYCDSEGKDKVLSWIQRLKIAVDCSRGLMFLHTYAGGCIIHRDIKPSNILIDTNMQAKLSDFGLSKVMDLDQSFVSSEVRGTLGYIDPEYRKNRHVKASGDVYSFGIVLLQLLSGRKVINFNLQRPMSLDNMARNLTRGGNISEFADPKLRGEYSAEAFSLTLKLAVSCIGLKQQRPSMEQVLRSLENALEITSQTKSFTSFTV	533

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele49g1057	533	ProSiteProfiles	Protein kinase domain profile.	271	519	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele49g1057	533	PANTHER	LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1	150	520	-	-
	Lele49g1057	533	FunFam	probable receptor-like protein kinase At5g59700	333	532	-	-
	Lele49g1057	533	Gene3D	Phosphorylase Kinase; domain 1	236	338	-	-
	Lele49g1057	533	SUPERFAMILY	Protein kinase-like (PK-like)	252	515	IPR011009	-
	Lele49g1057	533	Gene3D	Transferase(Phosphotransferase) domain 1	339	531	-	-
	Lele49g1057	533	Pfam	Protein kinase domain	347	513	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele49g1057	533	SMART	serkin_6	271	522	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele49g1057	533	Pfam	SPARK	25	170	IPR043891	-
	Lele49g1057	533	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	368	380	IPR008271	GO:0004672\|GO:0006468
	Lele49g1057	533	Pfam	Protein tyrosine and serine/threonine kinase	273	336	IPR001245	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele49g1057	Lele-ChrLele49	6805340	6808875	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele49g1057	254	521	Receptor kinase-like Gene Family	AT5G59700	37.966	2.04e-52	189

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_URK-2	Lele49g1057		Pkinase	9.8e-25	CL0016