Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1044 ATGAGGAGCTTCTTCCTCCTTCTCTTTATCCTCTTCTCATCCTTCTCTGTTCGCTTTGCCGGAGCCGGCGGTGATGTCGCTCTGGGTAAAAATCCCTTCACTCCTAAGGCATTCTTGATTCGGTATTGGGATAAGGAGATCCGGAATGGCCTGCCTAAGCCTGAGTTTTTGCTCTCTAAGGCGTCTCCATTGACTGCGGTGGACTCTGCGGCGTTTGCCAAGCTCGCCGCCAGCAACGCTCTTTCCACCCGCCTCCCGGAATTCTGCTCCGCCGCTAATCTGCTCTGTTTTCCCGATTTGGGTCGAAGTCTGGAGAAACACTCTAAGGATGTGAGCTTTGCTTCGTACCAGGACAAGAACTTCACCAACTATGGGACGGATCGGCTCGGTGGGGAGGACTCTTTTCAGAAATATTCCGAAGGGGAGAATATTCCGGTGAATGATTTCCGGCGATATAGCCGTGACTCCACCGGTCACAAGGACAATTTCCAAAGCTACGCAAGTAATGGCAACGTGGTGGACCAGAGTTTCCATACCTACGGCACCTCAGCAACAGGCGGCGTTGGCGAATTCAAGAAGTACGCCGATTCCACCAATGTTCCCAATCTTCAATTCACCTCCTACTCTGATGATGGAAACGGGAGAGAGCAATCGTTCGCTAGCTACTCCGAGAACGGAAATGCTGGGGACCAATCTTTCACCAACTATGGGAAACACGGGAATGGGGCTGTGAGCGATTTCACAAGCTACGGGACGAACTCGAACGTCGCCGGGTCGGGATTCACGAATTACGGCGAGACTGCGAATGCCGGGAATGAGACATTCACGAATTACGGTGTGAATATGAACAACCCTACCAATACCTTCAAGAACTACGCCTCCGGCGGCAATGGAGCCGCTGAGAGTTTCGCTAATTACAGAGACCAAGCCAATGTGGGAGCCGATTCATTCCAATCATATGCTAAGGGTGCAAACGCAGCAGAAGTCGATTTTACGAACTACGGCAAATCCTTCAACGAAGGGACAGACAAATTCACCGGCTACGGAAAAGAAGGTAATGAGCATAAAATTGGCTTCAAAACCTATGGAACGAACAATACCTTCAAGGACTACACGAAAGACGGCGTCACATTCACAGGCTACACCAATGTGAGCACCACTCTCAGCGCTTCCATGGCGAAATCTGGTTCAGCCATCAATGGCAATTTGGTAAAAAGGTGGGTAGAACCAGGTAAATTCTTCCGTGAATCGATGCTGAAGAAAGGGACGGTGATGCCTTTCCCGGATATCAGAGATAAAATGCCCAAGAGGTCGTTCTTGCCCCGATCTATCATCTCCAAATTACCATTCTCAACCTCGAAAATCACCGAGCTGAAGCAGATTTTCAAAGTTTCTGATAATTCCTCCATGGACAAGATGCTATCGAGCTCCCTAAGCGAGTGCGAGAGAGCTCCGAGCCCCGGCGAGACCAAGCGCTGCGTCGGCTCCGTCGAGGACATGATCGACTTCGCGACCTCCGTGCTAGGGCGCAACGTCATCGTTCGAACCACCCAGAACGTGAAGGGGTCGAAGGAGAACGTGGTCGTGGGTCGGGTCGAGAAGATAAACGGTGGCCGGGTCACCGAGTCCGTATCATGCCACCAGAGCCTCTTCCCTTACCTACTTTACTACTGCCACTCCGTCCCCAAAGTTCGGGTCTACGAAGCAGACCTCCATGACCCGAAAACCAAGGCCAAGATCAACCACGGTGTTGCCATCTGTCACCTGGACACCACCGCGTGGAGCCCCACACATGGCGCCTTCCTCTCACTCGGATCGGGTCCGGGTCGGATCGAAGTGTGCCACTGGATCTTCGAGAATGACATGACCTGGACCATTGCCAATTAA 1887 0.5204 MRSFFLLLFILFSSFSVRFAGAGGDVALGKNPFTPKAFLIRYWDKEIRNGLPKPEFLLSKASPLTAVDSAAFAKLAASNALSTRLPEFCSAANLLCFPDLGRSLEKHSKDVSFASYQDKNFTNYGTDRLGGEDSFQKYSEGENIPVNDFRRYSRDSTGHKDNFQSYASNGNVVDQSFHTYGTSATGGVGEFKKYADSTNVPNLQFTSYSDDGNGREQSFASYSENGNAGDQSFTNYGKHGNGAVSDFTSYGTNSNVAGSGFTNYGETANAGNETFTNYGVNMNNPTNTFKNYASGGNGAAESFANYRDQANVGADSFQSYAKGANAAEVDFTNYGKSFNEGTDKFTGYGKEGNEHKIGFKTYGTNNTFKDYTKDGVTFTGYTNVSTTLSASMAKSGSAINGNLVKRWVEPGKFFRESMLKKGTVMPFPDIRDKMPKRSFLPRSIISKLPFSTSKITELKQIFKVSDNSSMDKMLSSSLSECERAPSPGETKRCVGSVEDMIDFATSVLGRNVIVRTTQNVKGSKENVVVGRVEKINGGRVTESVSCHQSLFPYLLYYCHSVPKVRVYEADLHDPKTKAKINHGVAICHLDTTAWSPTHGAFLSLGSGPGRIEVCHWIFENDMTWTIAN 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1044 628 Pfam BURP domain 413 625 IPR004873 -
Lele49g1044 628 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 13 628 - -
Lele49g1044 628 ProSiteProfiles BURP domain profile. 413 627 IPR004873 -
Lele49g1044 628 SMART BURP_2 411 627 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1044 Lele-ChrLele49 6718150 6720150 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0924 53 18863300 18867462 Lele49g1044 49 6718150 6720150 CCT
Lele54g0906 54 15578332 15581044 Lele49g1044 49 6718150 6720150 CCT
Lele55g0552 55 3567596 3571555 Lele49g1044 49 6718150 6720150 CCT
Lele49g1044 49 6718150 6720150 Lele49g1044 49 6718150 6720150 ECH
Lele49g1044 49 6718150 6720150 Lele51g1062 51 6835657 6837658 hybridization
Lele49g1044 49 6718150 6720150 Lele52g1102 52 7470835 7472830 hybridization