Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele49g1042 | ATGTCCCCTTCTGCTTCATTCTCCTCCACAGCTTCCCACCTCAGGACCCTTCCCTCTTCTGTTCCTTCCACCACCATCTCTCGATTTCCCCTCACTTTCCGGGAAAATCGGAAACAGGTCACACCCACAAATACTTCTACCCAAAAACGTAATCTTTCTTCGTCGAGGTGTGGTAGATTTGTGGTGAAATCACAGACCACTAGTGCTCCTGTTTCTTCTGAGTCTGTAAATGTCTCAGCCGTACCTTCCCAAATGAAGGCATGGGTTTATGGAGAGTATGGGGGTGTTGATGTTTTGAAGTTCGATTCGAACGTTGGTGTGCCTGATTTTAAGGAAGATGAGGTGCTCGTTAAGGTTGTCGCTGCTGCTCTTAACCCCGTTGACGCTAAGAGAAGGCAGGGCAAGTTCAAGGCCACTGATTCTCCCCTTCCGACTGTTCCAGGTTATGATGTTGCTGGAATAGTGGTGAAGGTCGGTAGCCAAGTGAAAGACTTCAAAGTGGGTGATGAAATATATGGGAATATAAATGAGAAAGCCCTTGAGGGACCTAAGCAGTTTGGAACTCTGGCAGAGTATACTGCTGTTGAAGCGAAATTGAATTTTATTAAGTTTCTTTATTTATAA | 624 | 0.4551 | MSPSASFSSTASHLRTLPSSVPSTTISRFPLTFRENRKQVTPTNTSTQKRNLSSSRCGRFVVKSQTTSAPVSSESVNVSAVPSQMKAWVYGEYGGVDVLKFDSNVGVPDFKEDEVLVKVVAAALNPVDAKRRQGKFKATDSPLPTVPGYDVAGIVVKVGSQVKDFKVGDEIYGNINEKALEGPKQFGTLAEYTAVEAKLNFIKFLYL | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele49g1042 | 207 | SUPERFAMILY | GroES-like | 84 | 199 | IPR011032 | - | |
| Lele49g1042 | 207 | Gene3D | - | 66 | 203 | - | - | |
| Lele49g1042 | 207 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Lele49g1042 | 207 | Pfam | Alcohol dehydrogenase GroES-like domain | 113 | 175 | IPR013154 | - | |
| Lele49g1042 | 207 | PANTHER | NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC | 76 | 199 | IPR044626 | GO:0016628 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele49g1042 | Lele-ChrLele49 | 6685108 | 6686796 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele49g1042 | 140 | 171 | Monolignol Biosynthesis Gene Families | AT1G72680 | 59.375 | 3.46e-06 | 45.1 |