Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1036 ATGCTACACATTTTGGCGCTGCCAATAACTTATATAAGAAACCAGCCTGGAAAAGCGAATTATGCACAAGAGGGCTTTTATACTTCCCACGCTCCAACCTCTCCCAACAATAAAACTGGGAATCAAGCAGGAGCTGTGCAACATTTTGGGAGTTCAGACTCTCCCTGGGGTAATGGTCAGATATCTTTTAGCTATGAGCAGATTACGGAGATAACTCGAAGATTTTCTAGTGAAAATATTATAGGGGAGGGGGGATTTGGACATGTGTACAAGGGTTGGCTTTCAGATGGAAAAGAAGTGGCTGTGAAGCAGCTTAAGGCTGGTAGCGGCCAAGCCAGAGGAGTGAAAGTCTTAGAGTGGGACAAGAGGATGAAGATTGCAATTGGCTCCGCAAAAGGCTTAGCATATTTGCATGAAGACTGCAACCCAAAAATTATCCACAGAGATATTAAGTCAGCGAACATACTTTTGGATAATGCGTTTGAGGCACAGGTTGCAGACTTTGGACTTGCTAGGCTACACGATGGTGTTAACACGCATGTTTCAACACGGGTTATGGGGACTTTTGGGTAG 573 0.445 MLHILALPITYIRNQPGKANYAQEGFYTSHAPTSPNNKTGNQAGAVQHFGSSDSPWGNGQISFSYEQITEITRRFSSENIIGEGGFGHVYKGWLSDGKEVAVKQLKAGSGQARGVKVLEWDKRMKIAIGSAKGLAYLHEDCNPKIIHRDIKSANILLDNAFEAQVADFGLARLHDGVNTHVSTRVMGTFG 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1036 190 SUPERFAMILY Protein kinase-like (PK-like) 57 189 IPR011009 -
Lele49g1036 190 ProSitePatterns Protein kinases ATP-binding region signature. 81 103 IPR017441 GO:0005524
Lele49g1036 190 ProSiteProfiles Protein kinase domain profile. 1 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g1036 190 FunFam Os07g0541700 protein 104 188 - -
Lele49g1036 190 Gene3D Transferase(Phosphotransferase) domain 1 60 112 - -
Lele49g1036 190 SMART tyrkin_6 75 189 IPR020635 GO:0004713|GO:0006468
Lele49g1036 190 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 40 112 - -
Lele49g1036 190 MobiDBLite consensus disorder prediction 30 53 - -
Lele49g1036 190 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Lele49g1036 190 Gene3D Transferase(Phosphotransferase) domain 1 113 190 - -
Lele49g1036 190 Pfam Protein kinase domain 122 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1036 Lele-ChrLele49 6654576 6656411 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1036 46 190 Trihelix Transcription Factor Family AT1G23540 54.592 9.80e-62 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lele49g1036 Pkinase 5e-12 CL0016