Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1035 ATGATGGATCTGATGCTTTCTCCTTCACTTCGCAGGTACTTGGCTCCAGAGTATGCAACAAGTGGAAAATTGACAGATAGATCAGATGTTTACTCTTTCGGAGTTGTCCTCCATGAACTTATAACAGGGAGGAAACCTGTCGATCAAACTCGGCCTGTGGGAGAAGAGAGTTTGGTTGAGTGGGCTCGTCCACTTCTCCATCGCGCTATTGAGACCCGAGACTTCAGTGAATTAGTGGACAAAAGGCTTAACATGCAATTTGTGGAGAGCGAGATGTACACAATGATTGAAGCTGCCGCAGCTTGTGTTCGCCACTCTGCTCCAAAACGGCCTCGCATGATTCAGGTTGTAAGAGCATTGGATAGTCAAGATGAATCATGTGATTTATCAAATGGGGTTAAATATGGTCAGAGCACTATTTATGATGCCGGCCACTACAGTGAAGAAGCTATTATGAGATTCAGGAAGATGGCCATTGATAGCTGTAGTGAGTGTGAATTTGATAGGGACAGTGGAGATTTATCTTCTCCAGTAGAGCTTTCTGGACAACAACATTCATGGCTCAAGGGTGCTTCAAGTGGCGAGTCAGAGACCCGGGCTTTCAATGCAAGTAGAAGGACCTAG 624 0.4551 MMDLMLSPSLRRYLAPEYATSGKLTDRSDVYSFGVVLHELITGRKPVDQTRPVGEESLVEWARPLLHRAIETRDFSELVDKRLNMQFVESEMYTMIEAAAACVRHSAPKRPRMIQVVRALDSQDESCDLSNGVKYGQSTIYDAGHYSEEAIMRFRKMAIDSCSECEFDRDSGDLSSPVELSGQQHSWLKGASSGESETRAFNASRRT 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1035 207 Pfam Protein tyrosine and serine/threonine kinase 12 120 IPR001245 GO:0004672|GO:0006468
Lele49g1035 207 Gene3D Transferase(Phosphotransferase) domain 1 8 139 - -
Lele49g1035 207 MobiDBLite consensus disorder prediction 172 207 - -
Lele49g1035 207 MobiDBLite consensus disorder prediction 176 200 - -
Lele49g1035 207 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 12 165 - -
Lele49g1035 207 SUPERFAMILY Protein kinase-like (PK-like) 11 121 IPR011009 -
Lele49g1035 207 ProSiteProfiles Protein kinase domain profile. 1 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1035 Lele-ChrLele49 6652831 6654205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1035 13 175 Trihelix Transcription Factor Family AT1G70460 68.712 9.39e-73 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lele49g1035 PK_Tyr_Ser-Thr 3.4e-11 CL0016