Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1034 ATGCCAGGCTTGGAGCTAGCAGCAGTGGTGGAGGAATTCAGAACCTTGACTGAGACTAAAGCTTGGGACTATGTTGTACTATGGAAGTATGGCGATGATCCCTCAAGATTTATCGAGTGCATGGGTTGTTCATCCAGTGAGAACAAAGGCTTTTGTGAGGATTCAACAGGAACGCAAGTTTTGATCCCTATTATTGGTGGTATTATAGAGCTCTTCTCAGCAGAGATTATGGATAGGGCATCTATTGTTGGAGACGCCATTGATTATATAAAGGAACTGCAGGAACAAGAAAAAGGACTTGGAGAAGAGATGAGAGCCGTGGAAGAAGAGGACTATAAAAAGAACAAACCACAGAGGAGGAGGCCAATATTGAATTTTCATCTTGATGACACAAAAAGCACCCAGATGGGGGTGCAGGTAACTGATACTAATGTGAACAAATTTGGTGACAAAGTCATGAATATTCTGACTGCAAACAAGCTTGATATTCACCCAGATATATTGAGAGATTATTTAACTAAGCAAGCTGGTTCTCAAGAAAGAGGAGTTGATGCTGAGTTCAAGAAAGCTTAG 573 0.4136 MPGLELAAVVEEFRTLTETKAWDYVVLWKYGDDPSRFIECMGCSSSENKGFCEDSTGTQVLIPIIGGIIELFSAEIMDRASIVGDAIDYIKELQEQEKGLGEEMRAVEEEDYKKNKPQRRRPILNFHLDDTKSTQMGVQVTDTNVNKFGDKVMNILTANKLDIHPDILRDYLTKQAGSQERGVDAEFKKA 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1034 190 Coils Coil 90 110 - -
Lele49g1034 190 Gene3D - 57 116 IPR036638 GO:0046983
Lele49g1034 190 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 77 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1034 Lele-ChrLele49 6650323 6652354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1034 6 56 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 35.294 9.06e-06 43.5