Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1014 ATGTACGATCTCTCGTCATCCCCTGTGGATTACTCCGACAAAGCTATCATGTCGCCGGAGAATCTGATTTTCCCCGAAGACTTTCTGAGCTTCCTCATGTCTTCCTCCGCCGCACCACCTGGCTTCCGTGATCGGATTCCCGTTTTAGGATCCGAAGAGTTGATTTCCGCTGCCTCCCCGATTACCGAAGTCGAAGCCTCCGTCCCTGCTGCTCCTGAATTTGGGCCCCAAGAGGAGGACGATTCTTCCTCCATCATCAAAGCCAGAATCGCATCTCATCCTCACTATCCTCGTCTCATTCAAGCTTATATCGATTGCCAGAAGGTAGGGGCACCTCCAGAAATAGCGTGTTTGTTGGATGAAATCCGGCGAGAAAACGACCTTAGCAAGAGGGACGTTGTTTCCACGTGCTTTGGAGACGACCCCGAGCTCGACGAGTTCATGGAAACCTACTGCCACGTGCTGATGAAGTATAAATCTGATCTTGCTCGGCCTTTTGATGAAGCAACCTCCTTCCTCAACAAGATCGAAACTCAGCTCAGCAATCTCTGCAATGGTGCTTCCGTTCTAAGCCTCTCCGGTCAGTTCTTGATTCTTCCCTTCTCTAGCTCTCTCTCTCTTCCCCTTACCTTTCTAATGTAG 642 0.5047 MYDLSSSPVDYSDKAIMSPENLIFPEDFLSFLMSSSAAPPGFRDRIPVLGSEELISAASPITEVEASVPAAPEFGPQEEDDSSSIIKARIASHPHYPRLIQAYIDCQKVGAPPEIACLLDEIRRENDLSKRDVVSTCFGDDPELDEFMETYCHVLMKYKSDLARPFDEATSFLNKIETQLSNLCNGASVLSLSGQFLILPFSSSLSLPLTFLM 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1014 213 Pfam KNOX1 domain 86 127 IPR005540 GO:0003677|GO:0005634
Lele49g1014 213 SMART KNOX1_2 84 128 IPR005540 GO:0003677|GO:0005634
Lele49g1014 213 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 77 186 - -
Lele49g1014 213 SMART KNOX2_2 134 185 IPR005541 GO:0003677|GO:0005634
Lele49g1014 213 Pfam KNOX2 domain 138 184 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1014 Lele-ChrLele49 6459859 6461218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1014 1 186 Homeobox Transcription Factor Family AT1G23380 59.375 7.37e-68 209