Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1012 ATGCGAGCATTTCATCTTTCATGGCTTTCTTTCTTCTCCTGTTTCCTCTCCAGCTTCGCCGCGCCGCCTCTTCTCCCCGTTATTCGTGACAATCTCAACCTCACCACCTCCGATATCGGCAACGCTGGTGTGGCCTCTATCTCCGGCGCTGTTTTCGCCCGTATCGCCATGGGCACCGCCTGTGACCTCTTCGGTCCCCGCCTTGCCTGTGCCACACTCATCCTCCTCACCGCCCCCGCCGTCTTCTTCACCGCCATCATATCCTCACCCACCTCTTTCCTCCTCGTCCGCTTCTTCACCGGCTTCTCTCTCTCCACCTTCGTCTCCACGCAGTTCTGGATGAGCTCTATGTTCACGTCCTCCGTCGTTGGCTCCGCCAATGGATTCGCCGCCGGGTGGGGAAACCTCGGAGGAGGTGCCACACAACTCATAATGCCGTTAGTCTTCAACGTTATCCGCGACATAGGGTCGACGGAATTCACTGCATGGCGCATCGCCTTCTTCGTTCCCGCGCTTTTTCAAATGTTCACAGCCTTCTCGGTGTTAATACTGGGACAAGACCTGCCGGACGGGAACTACTGCGGACTGAAAAAATCAGGAGAGAAGGCGAACGACGATTTTTCTAGGGTTTTATACCACGGCTTTAAGAATTACAGAGGATGGATTTTAGGGTTGACGTATGGGTATTGTTTTGGGGTAGAACTCACGGTGGATAACATAATAGCTGAGTATTTCTTCGACAGGTTTAACCTGAAGCTTCACACGGCCGGCATGGTGGCTGCCAGCTTCGGTCTGGCGAACGCGTTTTCGCGGCCGGCCGGAGGGTTTTTATCGGATTCAATGGCAAGGAGGTTTGGGATGAGAGGTAGGTTATGGGCGTTGTGGCTCTGTGAAACGTTGGGAGGAATTTTCTGCATAATACTTGGCCTTGTAGGGTCTTTAGAAGCTTCCATCGTTGTTATGATCATATTCTCTGTGTTCGTTCAAGCTGCTTGTGGACTCACTTTTGGAGTTGTGCCGTTTGTCTCAAGAAGGTCGCTGGGGGTGGTATCAGGGATGACAGGAGGAGGAGGGAACGTAGGAGCAGTATTAACGCAGTTAATATTCTTCAGGGGCCAAGTCTCTAAGGAAAGAGGCATTACCCTTATGGGAGTCATGATCGTTCTTTGTACTCTCCCCATCTGTCTCATTCACTTCCCTCAATGGGGTGGCATGCTGTGGGGCCCATCTTCTTCCTCCGGTAAGGTCGCCACCGAACAAGACTACTATCTCTCAGAATAG 1281 0.5238 MRAFHLSWLSFFSCFLSSFAAPPLLPVIRDNLNLTTSDIGNAGVASISGAVFARIAMGTACDLFGPRLACATLILLTAPAVFFTAIISSPTSFLLVRFFTGFSLSTFVSTQFWMSSMFTSSVVGSANGFAAGWGNLGGGATQLIMPLVFNVIRDIGSTEFTAWRIAFFVPALFQMFTAFSVLILGQDLPDGNYCGLKKSGEKANDDFSRVLYHGFKNYRGWILGLTYGYCFGVELTVDNIIAEYFFDRFNLKLHTAGMVAASFGLANAFSRPAGGFLSDSMARRFGMRGRLWALWLCETLGGIFCIILGLVGSLEASIVVMIIFSVFVQAACGLTFGVVPFVSRRSLGVVSGMTGGGGNVGAVLTQLIFFRGQVSKERGITLMGVMIVLCTLPICLIHFPQWGGMLWGPSSSSGKVATEQDYYLSE 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1012 426 FunFam High affinity nitrate transporter 2.5 1 192 - -
Lele49g1012 426 Pfam Major Facilitator Superfamily 8 364 IPR011701 GO:0022857|GO:0055085
Lele49g1012 426 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 402 IPR020846 GO:0022857
Lele49g1012 426 Gene3D MFS general substrate transporter like domains 1 193 IPR036259 -
Lele49g1012 426 FunFam Nitrate transporter 2.1 204 404 - -
Lele49g1012 426 CDD MFS_NRT2_like 4 396 IPR044772 GO:0015112
Lele49g1012 426 Gene3D MFS general substrate transporter like domains 206 401 IPR036259 -
Lele49g1012 426 SUPERFAMILY MFS general substrate transporter 2 396 IPR036259 -
Lele49g1012 426 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 426 IPR044772 GO:0015112
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1012 Lele-ChrLele49 6445997 6448072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1012 1 426 Inorganic Solute Cotransporters AT1G12940 73.536 0.0 652