Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0990 ATGTTACCGAGAACGATCCTCCCTTCTGAGTCAATCTCAAGAAATTCCCCTAAGCCATTGGTCACTTCATCTCTCTTAACCCCACCACCTTCCCTGACCTCCTTTTCATTAACAATGGAAGAAGCTTTCAGGCGTCTCAACGGCCTCGATTCCAACAACTCCTTCTCCGATCACCACCACCACAAGAAGTGCGCCTCCGCAGCCAACAAGAGGGCTTCGAGAGATAACAGCGCCCCCGGCGCTATGAGGTACCGTGGAGTTAGGCGTAGGCCCTGGGGCCGTTACGCCGCCGAGATAAGGGACCCTCTGTCGAAAGAGCGGCGTTGGCTTGGTACCTTTGATACGGCGGAGGAAGCCGCTTGTGCCTACGACTGCGCCGCCCGAGCCATGCGTGGCCTTAAAGCTCGTACCAACTTCGTCTACCCAACTTCTTCTTCTCCTTACTCTGTTCCTTACAATCTCTTACCTCCTTCCTTCAACTTCCCCAAACAATCTCAGACTTCGTCCGCTAATATTAAGAAGAACCTCCATAACCACCCCCATGTGGGAGCTTCTAGTTGGTCCAACCGTCGTACCTGTACTTCAACCCACCGAAACTCCATGATTATGCACCCTGATGTTCTCAAGCCTTATGTGGTTCCTTCTCCTTCATCATCATCGTCGTCCACCTGTCCCACGTGTACTTGTCGCCAAGGTTTCTGTCCGATGAACTCTTCTGGCGGCACTAATACTGCTACTAGTAGTAGCACGTGTGGGTCTGCTTCCGTCTCGATGACCACAAGCCATAGTCATAACGGAATAATATTAAAGAACGATTGTGAAGAAGCTGAAGATGGATTTGCGTTCTTTCCAAGAGAAGCTTCAGACTCGGGTTTGTTGGAGGAGATAGTTCATAAATTTATGTTAACTTCGAAGCCCAAGAAATTTGAGAAGTCTCCCCCAGAATTCCTCCCTCCCAGTCAGCCTCAGTCTCAGTCAGTGCCTGATCCTACGTTCGTTTCTGCTCCTCAGTGCTATTACGAAACCAAGAAAGAGGGTTTTGGTGTGTATTTGGACGATGGACAAGGTTTTGTTCCCATGCAGCAGCAGCAACAGTTTGAGGGTTTTGATGAGCAGGCTATGCATTTCGGCAACAACGGTGTTCAGTTGATGAATAACCATGCAGATTTCTCAATCACGCAAGATCTTGTTCGTTATCAAGAGATTCTTAATGCCTTTGCATCCAGCGTCCACAATGCTTAA 1242 0.4911 MLPRTILPSESISRNSPKPLVTSSLLTPPPSLTSFSLTMEEAFRRLNGLDSNNSFSDHHHHKKCASAANKRASRDNSAPGAMRYRGVRRRPWGRYAAEIRDPLSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVYPTSSSPYSVPYNLLPPSFNFPKQSQTSSANIKKNLHNHPHVGASSWSNRRTCTSTHRNSMIMHPDVLKPYVVPSPSSSSSSTCPTCTCRQGFCPMNSSGGTNTATSSSTCGSASVSMTTSHSHNGIILKNDCEEAEDGFAFFPREASDSGLLEEIVHKFMLTSKPKKFEKSPPEFLPPSQPQSQSVPDPTFVSAPQCYYETKKEGFGVYLDDGQGFVPMQQQQQFEGFDEQAMHFGNNGVQLMNNHADFSITQDLVRYQEILNAFASSVHNA 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0990 413 Gene3D AP2/ERF domain 82 141 IPR036955 GO:0003700|GO:0006355
Lele49g0990 413 FunFam Ethylene-responsive transcription factor 2 82 141 - -
Lele49g0990 413 MobiDBLite consensus disorder prediction 8 27 - -
Lele49g0990 413 MobiDBLite consensus disorder prediction 1 27 - -
Lele49g0990 413 PRINTS Ethylene responsive element binding protein signature 106 122 IPR001471 GO:0003700|GO:0006355
Lele49g0990 413 PRINTS Ethylene responsive element binding protein signature 84 95 IPR001471 GO:0003700|GO:0006355
Lele49g0990 413 MobiDBLite consensus disorder prediction 54 81 - -
Lele49g0990 413 Pfam AP2 domain 83 132 IPR001471 GO:0003700|GO:0006355
Lele49g0990 413 ProSiteProfiles AP2/ERF domain profile. 83 140 IPR001471 GO:0003700|GO:0006355
Lele49g0990 413 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 67 251 - -
Lele49g0990 413 MobiDBLite consensus disorder prediction 308 329 - -
Lele49g0990 413 SMART rav1_2 83 146 IPR001471 GO:0003700|GO:0006355
Lele49g0990 413 CDD AP2 83 139 IPR001471 GO:0003700|GO:0006355
Lele49g0990 413 SUPERFAMILY DNA-binding domain 83 140 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0990 Lele-ChrLele49 6280925 6282166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0990 39 145 AP2-EREBP Transcription Factor Family AT1G24590 58.268 5.01e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele49g0990 AP2 1.2e-11 CL0081