Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0974 ATGCTGGAGACTTCGACTCTCTTGCAACATAAACAGGCCAGTACACGCCTTATCTTGCAAATCCCAGTCTTTCAAGTGTCACTCTTTTCTAGCACCTGGCGACCAAGTGAACTACCTTTTGTTAAGGCGGCTGCCACAGCATTGGCAAGGTCCTGTAATGTTTTACAAGGTAATCCTGTCATAGCAAAGTTAATTCCAGCACTTGGTGTAATCACATTTGCTATATGGGGTGTCAGCCCATTACTATTTCTAACAAGAAAACTGTTCCTTCAGAAGGATAGCAATTGGAAGAAAAGCAGCACAAATTATATAGGAACTTCTTATCTTCAACCAATATTGTTATGGATTGGAGCTATACTTGTGTGCAGATCTTTGGAGTCAATAGTTCTGCCTACAGAAACTAGCCAGATTGTTAAGGGAAGGCTTTTGAATTTTGTAAGATCATTGTCAACTGTACTGTCATTCGCGTATTGTTTATCAAGTGTGATTCAACAAGCACAGAGATTCTTTGTTCAGAGTGCTGATGCCAATGAGGCAAGAAATATGGGGTTCCAATTTGCCAGCAATGCTGTGTACTCTGCAGTATGGATTGCCGCCTTTTCATTGTTCATGGAATTGCTGGGTTTCTCTACCCAGAAATGGCTTACTGCAGGGGGTCTTGGGACAGTTTTGCTTACTCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCAAGCTTGATGATTCACGCAACCAGACCTTTTGTGACGAATAAACAAGGATTGAAGGATATGAAGTTTCTGGTCATGTAG 792 0.4141 MLETSTLLQHKQASTRLILQIPVFQVSLFSSTWRPSELPFVKAAATALARSCNVLQGNPVIAKLIPALGVITFAIWGVSPLLFLTRKLFLQKDSNWKKSSTNYIGTSYLQPILLWIGAILVCRSLESIVLPTETSQIVKGRLLNFVRSLSTVLSFAYCLSSVIQQAQRFFVQSADANEARNMGFQFASNAVYSAVWIAAFSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSLMIHATRPFVTNKQGLKDMKFLVM 263
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0974 263 Gene3D - 146 246 - -
Lele49g0974 263 Pfam Mechanosensitive ion channel 190 248 IPR006685 GO:0016020|GO:0055085
Lele49g0974 263 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 21 251 IPR045042 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele49g0974 Lele-ChrLele49 6144570 6146610 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0974 16 252 Mechanosensitive Ion Channel Family AT5G10490 58.678 2.10e-95 292