Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0969 ATGGCTCACGCTATGAACTGGTTGTCGTTTTCGTTATCGCCGATGGAGATGCTGAGGGCATCCGATTCTCAGTTCGTTCAATACGACAATCTCTCTGCTAACAATTCCTCTCACCACTTCGTCGATAATTTCTATGCCAATGGTAACCTAACGCTACGTTGGGGAGCGAATCTGAAGTCGCAAGCAGATTACTATGGCCAAGTTGAGCAAAACCAAAGCGGAGAGAGCTTGCCGGGTCCACACAATCAGAACGACGGAGTGCCGAAGCTGGAAGATTTTCTGGGCTACTCCGATAGCCAAACGGAGACGCAAGATTCGTCGCTGACTCAGATATACGAGCAGGGAGGAGGAGGCGCCGGCTACTTCGGAGACCCGCAAGATCTGAAAGCAATCGCTGGGTTTCAAGCTTTTTCTGCAACCTCCGGCTCCGAGGGGGAAGACTCTGCGTCCATCGCCAAGACAGCTCATCATCAGGCTGCTTGTGGGGAGTTCGCAATAGAGTCTTCCGGTTACGACGTACACCGATGGACGGGAAGATATGAAGCCCATCTATGGGATAACAGTTGCCGGAGAGAGGGTCAGGCGAGGAAAGGACGTCAAGGTGGATATGACAAAGAAGACAAGGCTGCTAGAGCTTATGATTTGGCTGCTCTAAAGTATTGGGGTCCGACTGCCACCACCAACTTTCCTATTTCGAGTTACGGAAAGGAATTGGAGGAGATGAAACATGTAACTAAGCAAGAATTCATTGCTTCACTGAGAAGGAAAAGTAGCGGTTTTTCTAGAGGAGCTTCTATATACAGGGGCGTAACAAGGCATCATCAGCAAGGACGATGGCAAGCGAGAATTGGTCGTGTTGCAGGAAACAAAGATCTATACCTTGGAACATTTGCTACTGAAGAGGAAGCAGCGGAGGCATATGATATTGCAGCTATTAAGTTCAGAGGTGCTGGTGCAGTGACGAACTTTGAGATGAACAGATATGATGTGGAAGCTATTATGAAGAGTACTCTTCCTGTCGGTGGATCAGTCAAACGAGCTAAACGTTCCCCAGAATCAGAACACCATATTGCTCTTCCTACCAATATCCATCAACCGCAATATCCAAACGCGATTAATACCAACGCAGGATCTATCAGTTTCACTCCCAATCAACCTGCACTAGCTTCTTCTATCCCTTGTGCCATTCCCTATGATTCTGCTGCAGCACATTACCACCCCAATCTCTTTCACCATTTTTATCCTACTAGCAGCTCTGCAACTGTGGATTCCAATGTATCTGTGACCGCCGCTCCCATAACTGCTCTGCCGGCTGCTGCTGCTGAGTTTTTCCTGTGGCCTCATCAGCCATGTTGA 1356 0.4853 MAHAMNWLSFSLSPMEMLRASDSQFVQYDNLSANNSSHHFVDNFYANGNLTLRWGANLKSQADYYGQVEQNQSGESLPGPHNQNDGVPKLEDFLGYSDSQTETQDSSLTQIYEQGGGGAGYFGDPQDLKAIAGFQAFSATSGSEGEDSASIAKTAHHQAACGEFAIESSGYDVHRWTGRYEAHLWDNSCRREGQARKGRQGGYDKEDKAARAYDLAALKYWGPTATTNFPISSYGKELEEMKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGAGAVTNFEMNRYDVEAIMKSTLPVGGSVKRAKRSPESEHHIALPTNIHQPQYPNAINTNAGSISFTPNQPALASSIPCAIPYDSAAAHYHPNLFHHFYPTSSSATVDSNVSVTAAPITALPAAAAEFFLWPHQPC 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0969 451 ProSiteProfiles AP2/ERF domain profile. 167 230 IPR001471 GO:0003700|GO:0006355
Lele49g0969 451 FunFam AP2-like ethylene-responsive transcription factor 265 326 - -
Lele49g0969 451 Pfam AP2 domain 266 316 IPR001471 GO:0003700|GO:0006355
Lele49g0969 451 MobiDBLite consensus disorder prediction 71 93 - -
Lele49g0969 451 CDD AP2 170 232 IPR001471 GO:0003700|GO:0006355
Lele49g0969 451 Gene3D AP2/ERF domain 170 232 IPR036955 GO:0003700|GO:0006355
Lele49g0969 451 Gene3D AP2/ERF domain 266 326 IPR036955 GO:0003700|GO:0006355
Lele49g0969 451 ProSiteProfiles AP2/ERF domain profile. 266 324 IPR001471 GO:0003700|GO:0006355
Lele49g0969 451 SUPERFAMILY DNA-binding domain 265 325 IPR016177 GO:0003677
Lele49g0969 451 CDD AP2 265 324 IPR001471 GO:0003700|GO:0006355
Lele49g0969 451 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 82 366 - -
Lele49g0969 451 SUPERFAMILY DNA-binding domain 170 232 IPR016177 GO:0003677
Lele49g0969 451 SMART rav1_2 174 236 IPR001471 GO:0003700|GO:0006355
Lele49g0969 451 SMART rav1_2 266 330 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0969 Lele-ChrLele49 6101668 6105375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0969 170 449 AP2-EREBP Transcription Factor Family AT5G65510 66.551 1.10e-114 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele49g0969 AP2 3.3e-05 CL0081