Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0967 ATGGAATCATTAGAGAAGCACAGAAGAGAGGTTTCCGGCGACGATCAGGAGTCACCGAGAGGTATACTGGAAATCCCTGTTTCGGGCACAGAATCTGATCACAGCGGAAGCAGCATCAGGAGCAGCAGCTACAGCTCAAGCTCGCCGGAGAAGTCATCGGAGTCGGAGAGAGTGATAGTGAGGGAAGGACCAGGACAGCCATGGAAAGCGATGATAGAGTCGTGGAAGAAGAAGTCAGTGAGGAGAATATCGGCCATTTCATTACTTGCAGCGAGCTACGAGATGTCGAGGAAGAGCTTGAGGAAGAGGAGGATGGAACGGATTCGAAGCGCAGAAGAAAGAATCAATCTGGGAGCGATCCCAACAAAGCCTTCATGGAGGAACTTCGATTACGCAGAGCTCCAAGCGGCAACAGAAGATTTCAATCCAGAGAACCTGATTGGACAAGGTGGGCATGCGGAAGTCTACAGAGGACGCTTACCGGATGGTCAACTTGTGGCGGTGAAGAGGCTAATGAAGAAGGAGAAGGAAAATGAGGACAGAGCGGGTGATTACTTATCAGAGCTAGGCATTATTGCCCACATAAACCACCCAAATGCTGCGCGTTTGATTGGGTTTGGGGTCAACAATGGTCTCTACTTTGTGTTGCAATTAGCCCCACATGGCAGCCTTTCTTCTCTGCTCTTTGGTTCTGAATGCTTGGAGTGGAAGATAAGGTTCAAGGTAGCCATTGGTGTGGCACAGGGCTTGAGATACCTTCATCATGATTGCCAAAGACGAATCATTCACAGAGACATCAAGGCCTCCAACATATTACTAAACGAAAATTACGAAGCTGAGATTTCAGATTTTGGACTTGCGAAATGGCTCCCGGAGAAGTGGACTCACCATGTTGTCTTCCCAATAGAAGGCACATTCGGGTATTTGGCTCCAGAGTATTTTATGCATGGAATTGTGGATGAGAAGACTGATGTATTCGCCTATGGGGTTTTGCTGCTGGAACTCATTACAGGTCGTCGTGCGGTTGATTCATGCAGCAAGCAAAGTCTTGTCCTCTGGGCAAAACCACGACTAGAAGAACACGATGTGAAGGAATTAGTGGACCCAAGATTAGGAGAAGCTTATGATTGCATTGAATTGAAGAGGACCATGCTTACTGCTTCCATGTGTCTCCATCACTCATCTACCCACCGTCCATACATGAAACAGGTTGTGCAGCTGCTGAAGGGTGAAGAGGGACTGGTTGATGTTAAGCAGAAATCAGTACCAATAAGATCCATCTTGTTAGATGCCAGTGACCTCGAAGAATATACTTGCTCTACTTACTTGAACGATCTCAATCGTCACAGGCAACTAGTCATGGAGTGA 1368 0.4744 MESLEKHRREVSGDDQESPRGILEIPVSGTESDHSGSSIRSSSYSSSSPEKSSESERVIVREGPGQPWKAMIESWKKKSVRRISAISLLAASYEMSRKSLRKRRMERIRSAEERINLGAIPTKPSWRNFDYAELQAATEDFNPENLIGQGGHAEVYRGRLPDGQLVAVKRLMKKEKENEDRAGDYLSELGIIAHINHPNAARLIGFGVNNGLYFVLQLAPHGSLSSLLFGSECLEWKIRFKVAIGVAQGLRYLHHDCQRRIIHRDIKASNILLNENYEAEISDFGLAKWLPEKWTHHVVFPIEGTFGYLAPEYFMHGIVDEKTDVFAYGVLLLELITGRRAVDSCSKQSLVLWAKPRLEEHDVKELVDPRLGEAYDCIELKRTMLTASMCLHHSSTHRPYMKQVVQLLKGEEGLVDVKQKSVPIRSILLDASDLEEYTCSTYLNDLNRHRQLVME 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0967 455 Gene3D Phosphorylase Kinase; domain 1 112 216 - -
Lele49g0967 455 SMART serkin_6 141 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0967 455 Pfam Protein kinase domain 144 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0967 455 Gene3D Transferase(Phosphotransferase) domain 1 220 422 - -
Lele49g0967 455 SUPERFAMILY Protein kinase-like (PK-like) 122 408 IPR011009 -
Lele49g0967 455 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 220 422 - -
Lele49g0967 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Lele49g0967 455 ProSiteProfiles Protein kinase domain profile. 141 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0967 455 MobiDBLite consensus disorder prediction 30 53 - -
Lele49g0967 455 ProSitePatterns Protein kinases ATP-binding region signature. 147 169 IPR017441 GO:0005524
Lele49g0967 455 MobiDBLite consensus disorder prediction 1 62 - -
Lele49g0967 455 PANTHER OS08G0249100 PROTEIN 10 422 - -
Lele49g0967 455 MobiDBLite consensus disorder prediction 1 17 - -
Lele49g0967 455 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 116 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0967 Lele-ChrLele49 6095588 6098913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0967 118 431 Trihelix Transcription Factor Family AT5G38560 41.231 4.32e-69 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele49g0967 Pkinase 1.5e-39 CL0016