Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0958 ATGGCGGTGCAACGGGAGGTTGAGCATCCCTGCAAGGCTTTTGGATGGGCCGCCAGAGATCCCTCCGGTCTTCTTTCCCCTTTCAACTTCTCTAGAAGGGAAACAGGGGAGAAAGATGTGGCATTCAAAGTGTTGTACTGTGGAATTTGCCATTCGGATCTCCACATGTTGAAGAATGAATGGGGCGTTTCCACTTATCCACTTGTTCCTGGGCACGAGATTGTTGGGATAGTAACAGAAGTGGGAAGCAAGGTAGAGAAATTCAAAGTTGGAGACAAGGTTGGAGTAGGATGCATGGTTGGATCCTGCAAATCCTGTCAAAGTTGCTCCGACAGTCTTGAGAACTATTGCCCAAAAATGATCCTCACGTACGGTTCTAAGTACGTGGATGGATCTCCCACTTATGGAGGCTATTCTAACTTGATGGTTGCAGAAGAACACTTTGTGATTCTAATCCCAGATGCTTTACCTCTTGATTCTGCAGCTCCTCTGCTTTGTGCTGGGATCACAGTGTATAGCCCCTTGAGATATTTTGGTCTTGATAAGCCAGGCCTTCATGTGGGTGTAGTTGGTCTTGGTGGACTTGGTCATTTAGCTGTCAAATTTGCTAAAGCTTTTGGGGCTAAGGTTACAGTAATCAGTACATCACCTAACAAAAAGAAGGAAGCTATTGAACGTCTTGGAGCTGATTCCTTTGTGGTCAGCACTGAGCCAGTTCAGATAAAGGCTGTATTAGGCACTCTTGATGGAATCATTGATACAGTTTCTGCAACCCATCCTCTGTTGCCTTTGCTTGGATTGTTGAAGTCTCATGGCAAACTCATAATGCTTGGTGCCCCACAGAAGCCTCTGGAGTTGCCAGTCTTCCCTTTACTCGCGGGGAGGAAGACGATAGCAGGAAGTGCCATTGGAGGGATTAAGGAGACACAAGAAATGATCGATTTTGCTTCTGAACACAATGTGAAACCTGACATTGAGGTTATTCCTGTGGATTATGTGAACACTGCAATGGAGCGTCTTCTCAAAGCAGATGTCAAATATCGATTTGTTATCGACATTGGCAACACCTTGAAGCCAAGCCCGTAG 1086 0.4586 MAVQREVEHPCKAFGWAARDPSGLLSPFNFSRRETGEKDVAFKVLYCGICHSDLHMLKNEWGVSTYPLVPGHEIVGIVTEVGSKVEKFKVGDKVGVGCMVGSCKSCQSCSDSLENYCPKMILTYGSKYVDGSPTYGGYSNLMVAEEHFVILIPDALPLDSAAPLLCAGITVYSPLRYFGLDKPGLHVGVVGLGGLGHLAVKFAKAFGAKVTVISTSPNKKKEAIERLGADSFVVSTEPVQIKAVLGTLDGIIDTVSATHPLLPLLGLLKSHGKLIMLGAPQKPLELPVFPLLAGRKTIAGSAIGGIKETQEMIDFASEHNVKPDIEVIPVDYVNTAMERLLKADVKYRFVIDIGNTLKPSP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0958 361 FunFam Putative cinnamyl alcohol dehydrogenase 6 324 353 - -
Lele49g0958 361 Gene3D - 16 353 - -
Lele49g0958 361 Pfam Zinc-binding dehydrogenase 194 316 IPR013149 -
Lele49g0958 361 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Lele49g0958 361 CDD CAD1 14 352 - -
Lele49g0958 361 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Lele49g0958 361 PANTHER ALDEHYDE REDUCTASE 6 356 - -
Lele49g0958 361 FunFam Uncharacterized protein 16 166 - -
Lele49g0958 361 Gene3D - 167 323 - -
Lele49g0958 361 SUPERFAMILY GroES-like 19 184 IPR011032 -
Lele49g0958 361 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Lele49g0958 361 Pfam Alcohol dehydrogenase GroES-like domain 38 150 IPR013154 -
Lele49g0958 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 322 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0958 Lele-ChrLele49 6037449 6039845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0958 12 361 Monolignol Biosynthesis Gene Families AT4G37990 74.286 0.0 504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0958 49 6037449 6039845 Lele51g0973 51 6146906 6149278 hybridization
Lele49g0958 49 6037449 6039845 Lele52g0992 52 6527354 6528974 hybridization