Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0944 ATGGAGGTGTTGGATAACCAGAGCTTAAGACTTGTTATGGTTCATATCCTTTGCCTTCTTCTGTTTATCAGATCAGCTTTTGCAAGTGAAGGTTTTGTGAGCATAGCTTGCTGTGCTGATTCAGATTATACAGATCCAAAGACTTCAGTAAATTACACATCAGATTTTAGTTTCTACCCAGAAAAAGCAAGTTGCTTAGACACAATTAAGCTTGTGGAGAACCATGGAGGCCATGGAAAAGCAAGGGTGTTTGGTATAGATAAAGGAAAAATATGTTACAACTTGCCAACAATTAAGAATCAAGTGTATCTGCTAAGGGGCACATTTCCATTTGATGAATCTCCGAATTCCTCTTTTGATGTTACAATTGGGGTTACCTTATTAGGTAGGGTAGAGAAACCATCTCAGGAGGTGGAATTACTTGAAGGAATTTTCAGAGCTACAAAGAATTACACAGATTTCTGCCTGGTGAAGGATGAAGAAGGAAGTCCTTATGTTTCATTGATTGAACTGCGGCCGTTGGATGAAGAGTACCTACATGATTATTCCCTTTCTAGTGTCCTAAAAGTGATCACAAGAAATAACCTAGGGGCCACCGGAGATGACATCAGGTACCCACTTGACCAAAGTGACAGAATCTGGAAAGCTACTTCAAATCCGTCATCTTCTCCCATAACATTGAATGCAAACATTTCCAGCAACAATGCTAATTCCACACCCCCTCTACAAGTTTTACGAACCGCTCTTACGCATTCTGAGCGATTGGAATTCATCCACAATGGCCTTGACCCTGGGAATTCCGAATACCGTGTGATTCTCCACTTTATTGAATTGAATAAGAGCGTAGGAGTGGGCAAAAGGGTGTTTGATATCTACGTCAATGGTGTCATCGAAGAGCCAAAGTTTGACATATTTGCTGGTGGATCTAACTACAGACAAGCTGTTTTGAACTTGTCGGCAAATGGTTCGTTGAATCTAACGTTGAGCAAGGCTTCTGGGTCTGAGAATGGACCGATTTGTAATGCATACGAGATCCTGAAGGTTATCCCTTGGATGCAGGAGACCAACCAAACAGACTCGGAAGTGATGTTGAAGCTGAGAGAGCAATTGTTGGAGAATAACAGAGGAAATAAAAAGCTGGAGAGTTGGACTGGAGACCCTTGCATTCTGTTTCCATGGCAGCATGTAGGTTGTGATAGTTTAAGTGGTCAACTTGTTATCACTAAACTGGATCTTTCTTCAAGTAATCTCCGAGGACCAATTCCTTCCAGTGTCACTGAGTTGTCCAACTTAAAAATACTGAACCTGAGCTACAATAGCTTAACTGGAAATATCCCCTCATTTCTGCCTTCATCTTTGCTTACATCAATAGATCTGAGTCACAATGATCTCACAGGATCGCTGCCATGGACCCTTCCCTTACTGCCACAACTAAAGACCTTGTATTTTGGCTGCAATAAGCGTATGAACAAGGAGATTCCAACTTCCTTGAAAAGCTTAGAAAATACAGATTATGGAAGTTGCAAACCTGGAGACCCAGGAATTTCACAAAAGCATATTGTCATTGGCACTGTTACTTGTGGATTGGTCCTGATCATTTTGGCTGTTGGAATTCTTTGTCGCTGCCATAGAAGAAAATTAGGGAAAACATCTGATGAAAAGGGATACCCAACAACCACAAATTTAATTTTCTCTCTAACCAGTAAAGATAATTTCTTCGTAAAGTCATTATCCATTCAAACATTCACCCCGGAATACATAGAGGCAGTCACCCAAAACTACAAGACTTTGATTGGTGAAGGAGGGTTTGGGTCTGTTTACCGTGGCACTCTAGATGATGGCCAAGAAGTGGCAGTGAAGGTCCGTTCAGCCACATCAACCCAGGGAACTCGCGAATTTGACAACGAGGTAAACTTGCTTTCTGCTATACGGCATGAGAACCTGGTGACTCTTATTGGTTACTGTTGTGAAAAGGATCAACAAATTCTGGTGTATCCTTTTATGGCTAATGGTTCACTACAAGATAGGCTTTATGGGGAACCAGCAAAGAGAAAACCATTAGACTGGCCAACCAGGTTATCTATTGCTCTCGGTGCAGCTCGAGGTTTGTCATATCTTCATACGTTTTCGGGACGTTCTGTTATACATAGAGATGTCAAATCAAGCAACATACTTCTGGATCACAGCATGTGTGCCAAGGTAGCAGACTTTGGTTTCTCAAAATATGCTCCTCAGGAAGGAGACAGTGGTGCTTCTCTTGAAGTAAGAGGAACCGCAGGATATATGGACCCTGAGTACTATACAACCCAGCAATTATCTGCAAAGAGTGATGTATTTAGCTTTGGCATGGTTCTACTTGAAATTCTGACTGGCCGGGAACCTCTCGACACACAAAGACCGCGCCATGAGTGGAACTTGGTGGAATGGGCTAAACCATACATAAAGGCGGCGAAGATCGATGAAGTAGTGGATCCTAGCATCAAGGGAGGATATCATGCAGAGGCCATGTGGAGGGTAGTGGAAACAGCACTGACATGTATTGAACCATTCTCAGTGCATCGACCAATCATGGCTGATATTGTTCGTGAGTTGGAGGATGCTTTGATTATAGAAAACAATGCATCAGAATACATGAAGTCCATAGAAAGCCTTGGAGGATCAAATCGTTACTCCATTGTGATAGAGAAGAAGATGGTAGCCCCATCTCCATCTACAACAGAATCAACCGTCTCTCCCAAAACCATGTCCCACCCACAGCCCAGATAA 2766 0.4241 MEVLDNQSLRLVMVHILCLLLFIRSAFASEGFVSIACCADSDYTDPKTSVNYTSDFSFYPEKASCLDTIKLVENHGGHGKARVFGIDKGKICYNLPTIKNQVYLLRGTFPFDESPNSSFDVTIGVTLLGRVEKPSQEVELLEGIFRATKNYTDFCLVKDEEGSPYVSLIELRPLDEEYLHDYSLSSVLKVITRNNLGATGDDIRYPLDQSDRIWKATSNPSSSPITLNANISSNNANSTPPLQVLRTALTHSERLEFIHNGLDPGNSEYRVILHFIELNKSVGVGKRVFDIYVNGVIEEPKFDIFAGGSNYRQAVLNLSANGSLNLTLSKASGSENGPICNAYEILKVIPWMQETNQTDSEVMLKLREQLLENNRGNKKLESWTGDPCILFPWQHVGCDSLSGQLVITKLDLSSSNLRGPIPSSVTELSNLKILNLSYNSLTGNIPSFLPSSLLTSIDLSHNDLTGSLPWTLPLLPQLKTLYFGCNKRMNKEIPTSLKSLENTDYGSCKPGDPGISQKHIVIGTVTCGLVLIILAVGILCRCHRRKLGKTSDEKGYPTTTNLIFSLTSKDNFFVKSLSIQTFTPEYIEAVTQNYKTLIGEGGFGSVYRGTLDDGQEVAVKVRSATSTQGTREFDNEVNLLSAIRHENLVTLIGYCCEKDQQILVYPFMANGSLQDRLYGEPAKRKPLDWPTRLSIALGAARGLSYLHTFSGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSGASLEVRGTAGYMDPEYYTTQQLSAKSDVFSFGMVLLEILTGREPLDTQRPRHEWNLVEWAKPYIKAAKIDEVVDPSIKGGYHAEAMWRVVETALTCIEPFSVHRPIMADIVRELEDALIIENNASEYMKSIESLGGSNRYSIVIEKKMVAPSPSTTESTVSPKTMSHPQPR 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0944 921 PANTHER OS07G0107800 PROTEIN-RELATED 33 868 - -
Lele49g0944 921 SUPERFAMILY L domain-like 379 501 - -
Lele49g0944 921 FunFam Nodulation receptor kinase 556 667 - -
Lele49g0944 921 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 668 877 - -
Lele49g0944 921 CDD STKc_IRAK 598 865 - -
Lele49g0944 921 Gene3D - 189 348 - -
Lele49g0944 921 Gene3D Ribonuclease Inhibitor 355 509 IPR032675 -
Lele49g0944 921 Gene3D Phosphorylase Kinase; domain 1 564 667 - -
Lele49g0944 921 ProSiteProfiles Protein kinase domain profile. 592 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0944 921 Pfam Leucine rich repeat 408 464 IPR001611 GO:0005515
Lele49g0944 921 ProSitePatterns Serine/Threonine protein kinases active-site signature. 714 726 IPR008271 GO:0004672|GO:0006468
Lele49g0944 921 FunFam Leucine-rich repeat receptor-like kinase 361 469 - -
Lele49g0944 921 ProSitePatterns Protein kinases ATP-binding region signature. 598 620 IPR017441 GO:0005524
Lele49g0944 921 Pfam Malectin-like domain 40 348 IPR024788 -
Lele49g0944 921 ProSiteProfiles Leucine-rich repeat profile. 430 452 IPR001611 GO:0005515
Lele49g0944 921 SUPERFAMILY Protein kinase-like (PK-like) 572 864 IPR011009 -
Lele49g0944 921 Pfam Protein tyrosine and serine/threonine kinase 595 861 IPR001245 GO:0004672|GO:0006468
Lele49g0944 921 MobiDBLite consensus disorder prediction 901 921 - -
Lele49g0944 921 Gene3D Transferase(Phosphotransferase) domain 1 668 884 - -
Lele49g0944 921 SMART serkin_6 594 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0944 Lele-ChrLele49 5943934 5949527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0944 9 871 Receptor kinase-like Gene Family AT1G67720 35.452 1.06e-142 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele49g0944 Malectin_like 1.9e-50 CL0202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0944 49 5943934 5949527 Lele51g0958 51 6044827 6051608 hybridization
Lele49g0944 49 5943934 5949527 Lele52g0980 52 6445866 6451491 hybridization