Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0925 ATGAACCTCTGGACCGATGAGAACTCCTCCTTGATGGAGGCTTTCATGAGCTCCGATCTATCTGCACTCTGGCCTCCTCCGCCTCAGCCCCAATCCTCTACTTCCACTACTACTCCTGGACCTGACCCCACCAAGCCTCTCTCACAGTGTCAGTCTTCCACTTCTCTCTTCAATCAAGAAACCCTTCAGCAGCGCCTTCAGGCTTTGATTGAAGGTGCCAGAGAGAGCTGGACCTACGCTATCTTTTGGCAATCGTCGTACGACTACGCCGGCGCGTCCTTGCTCGGCTGGGGCGATGGGTACTACAAAGGGGAGGAAGATAAAGGAAAAGGGAAGGCCAAAACGCTGTCGTCCGCGGCGGAGCAGGAATACCGGAAGAAGGTTCTACGCGAGCTGAATTCCCTCATTTCTAGATCCTCTGCCCCCAACGACGATGCCGTGGACGAAGAAGTCACCGATACAGAGTGGTTCTTCCTCGTTTCCATGACTCAATCGTTTGTCAACGGCGACGGGTTACCGGGTCAGGCCTTCTACAATTCCACTCCTGTCTGGATGACCGGTGGGGAGAGGTTGGCGGCTTCGACTTGCGAAAGAGCAAGACAGGGTCAGGTGTTCGGGCTTCAGACTTTGGTTTGTATACCGTCGGCGAATGGGGTGGTGGAGCTGGGATCCACTGAATTAATTTTCCAAAACTCGGATCTGATGAACAAGGTGAAGGCATGGTTCAATTTCAACAATCCAGAAATTGGTTCGTGGCCTCTCATGGCTTCTAATGCCGATCAAGGGGAGAACGACCCTTCCTCGCTTTGGCTTAACGATCCGTCTTCTGGAATTGAAATCAGAGATTCGACCAACACCAGTGTTCCGGCTACGGTTCCGAGCTCGAATAACACTCACAACGTCCAGACAGTTGCTAAACCAATGCAGTTTGAAACCCCAATTTCGAGTACTTTAACTGAAGCACCCAGTGTTGTTCATGTCCCGAATACTCAATACGGTAACCAGCAACGGCAACCGTCACAGCAATCGCGGAGCCAGGGGTTCTTATCGAAGGAGTTGAACTTTTCGGAATACAGGTTCGATGGGAACGGCCTAAAGAACGGGAATATGCATTCCTTGAAGCCGGAATCAGGTGAAATTTTGAACTTCGGGGAGAGCAAGAGGAACTCTTATAGTGGAAATGGGAATTTCTTTACAGGACAGGGTCCATTCGTCGCAGAAGACAGCAAAAAGAGGAGGTCACCTACTTCCAAGGGTAGTAATGATGAAGGGATGCTCTCGTTCACTTCCGGTGTGATTTTGCCCGCTTCTAATATGAAGTGTAGCGGCGGCGATTCCGATCACTCGGATCTTGAAGCATCGGTGGTGAAGGAAGCGGACAGTAGCAAAGTGGTAGAACTAGAAAAGCGACCTCGCAAAAGAGGTCGAAAGCCGGCGAATGGCCGGGAGGAGCCTCTGAATCACGTTGAAGCAGAGAGGCAGAGGAGAGAGAAGCTGAATCAGAGGTTCTACTCACTTCGTGCTGTGGTCCCAAACGTGTCAAAAATGGACAAAGCATCCCTCCTGGGCGACGCCATTTCTTACATCAACGAGCTCAAGTCGAAGCTCCAGAATCAAGAATCAAACAACAATGATTTGCAGAAGCAGCTAGATTCAGTCAAGAAGGAACTCGAGCTGGCCATAAGTAAAGATTCTCGCGCGCCTCCCCCAGATAGAGAACAAAAGACCTCCAACAACCAAGCAAACGACAAGCTAATAGATTTAGACATCGATGTGAAGATCATAGGTTGGGATGCAATGATTCGAATCCAATGTAGCAAAAGGAACCATCCAGCAGCGAGGTTGATGGCGGCTTTACAGGAACTAGACCTTGAAGTGAACCATGCGAGTGTGTCGGTAGTTAATGATCTGATGATCCAACAAGCAACAGTAAAAATGGGAAGTCGGTTTTACACGCAGGAACAGCTCCGGCTAGCACTTGTATCCAAGGTCGGAGATGTTCGATAA 2007 0.5002 MNLWTDENSSLMEAFMSSDLSALWPPPPQPQSSTSTTTPGPDPTKPLSQCQSSTSLFNQETLQQRLQALIEGARESWTYAIFWQSSYDYAGASLLGWGDGYYKGEEDKGKGKAKTLSSAAEQEYRKKVLRELNSLISRSSAPNDDAVDEEVTDTEWFFLVSMTQSFVNGDGLPGQAFYNSTPVWMTGGERLAASTCERARQGQVFGLQTLVCIPSANGVVELGSTELIFQNSDLMNKVKAWFNFNNPEIGSWPLMASNADQGENDPSSLWLNDPSSGIEIRDSTNTSVPATVPSSNNTHNVQTVAKPMQFETPISSTLTEAPSVVHVPNTQYGNQQRQPSQQSRSQGFLSKELNFSEYRFDGNGLKNGNMHSLKPESGEILNFGESKRNSYSGNGNFFTGQGPFVAEDSKKRRSPTSKGSNDEGMLSFTSGVILPASNMKCSGGDSDHSDLEASVVKEADSSKVVELEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQNQESNNNDLQKQLDSVKKELELAISKDSRAPPPDREQKTSNNQANDKLIDLDIDVKIIGWDAMIRIQCSKRNHPAARLMAALQELDLEVNHASVSVVNDLMIQQATVKMGSRFYTQEQLRLALVSKVGDVR 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0925 668 MobiDBLite consensus disorder prediction 20 51 - -
Lele49g0925 668 Gene3D - 475 561 IPR036638 GO:0046983
Lele49g0925 668 MobiDBLite consensus disorder prediction 440 492 - -
Lele49g0925 668 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 62 242 IPR025610 -
Lele49g0925 668 MobiDBLite consensus disorder prediction 35 51 - -
Lele49g0925 668 MobiDBLite consensus disorder prediction 445 492 - -
Lele49g0925 668 Pfam Helix-loop-helix DNA-binding domain 487 532 IPR011598 GO:0046983
Lele49g0925 668 FunFam Transcription factor bHLH13 476 550 - -
Lele49g0925 668 PANTHER MYC 37 663 IPR045084 GO:0003700|GO:0006355
Lele49g0925 668 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 486 552 IPR036638 GO:0046983
Lele49g0925 668 MobiDBLite consensus disorder prediction 400 426 - -
Lele49g0925 668 MobiDBLite consensus disorder prediction 561 580 - -
Lele49g0925 668 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 483 532 IPR011598 GO:0046983
Lele49g0925 668 CDD bHLH_AtAIB_like 480 556 - -
Lele49g0925 668 SMART finulus 489 538 IPR011598 GO:0046983
Lele49g0925 668 Coils Coil 529 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0925 Lele-ChrLele49 5792342 5794348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0925 1 665 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 54.985 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele49g0925 bHLH-MYC_N 2.9e-55 CL0161