Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0917 ATGGCCATCGAGACCCACGACACCACTATCATGGAAATCAAGCCCAAGAACAGGAGAATCATGGGTGCTGGAGGTCCTGATGACGAGGACAACAGATGGCCGCCATGGTTGAAGCCTTTGCTCAAAGAAAGCTTCTTTGTTCATTGCAAGGTGCACGCTGATTCTCCCAAGAGCGAATGCAATATGTATTGCTTGGATTGTATGAGCGGCGCTCTCTGTTCACTCTGCCTCGCCTACCACAGAGACCATCGTGTTATACAGATAAGGAGGTCATCATACCACGATGTGATTAGGGTCAATGAGATTCAGAAAGTTCTCGACATCTCCGGCGTTCAGACCTACATTATAAACAGCGCAAGGGTAGTGTTCTTGAACGAGAGGCCTCAGCCTAGGCCCGGGAAGGGCGTTACCAACACTTGCGAAGTCTGTGATCGTAGCCTCCTCGATTCCTATCGATTCTGTTCTCTCGGTTGCAAGATTGTGGGGACGTCGGGGGATTTCCAGAAGAAGAAAAGGTCGGCGGCATTCGCTTCGGAGTCAGAGGATTCGTACAGCAGCAGCAGCCACAGCCGGAACAAGAACGGTAAAGTTCAGAGCTTCACACCGTCGACGCCGCCGCCGACTTCGGTGAATTACAGAACGGCCAAGAGAAGAAAGGGAATACCTCACAGAGCCCCAATGGGAGGACTAATCATAGAATACTAA 705 0.5092 MAIETHDTTIMEIKPKNRRIMGAGGPDDEDNRWPPWLKPLLKESFFVHCKVHADSPKSECNMYCLDCMSGALCSLCLAYHRDHRVIQIRRSSYHDVIRVNEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCDRSLLDSYRFCSLGCKIVGTSGDFQKKKRSAAFASESEDSYSSSSHSRNKNGKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLIIEY 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0917 234 MobiDBLite consensus disorder prediction 178 211 - -
Lele49g0917 234 Pfam PLATZ transcription factor 89 160 IPR006734 -
Lele49g0917 234 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 27 227 - -
Lele49g0917 234 MobiDBLite consensus disorder prediction 178 228 - -
Lele49g0917 234 CDD Bbox2 48 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0917 Lele-ChrLele49 5728841 5730292 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lele49g0917 PLATZ 3.9e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0917 49 5728841 5730292 Lele49g0917 49 5728841 5730292 ECH
Lele49g0917 49 5728841 5730292 Lele51g0933 51 5821827 5823267 hybridization
Lele49g0917 49 5728841 5730292 Lele52g0949 52 6181924 6183396 hybridization