Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0913 ATGGAATCTGATCACTCACTTCAGTTTGTGCAATTACTTCTGTTCTCTCTGGTTCGGTCACTTGAAGAAGGGACGATGGCTCTGCTTGAGACTCTTTCTTCTAATGAGCTTTACAACTTCATTATCCATGACACTATCTCTGCAACCCCATTTGATTCCTCCTCAGAAAACAGAGTAGTGAATCATCATCCACTACTGGAACATTATGACCCTGCTTCTTCTTCTTCTTCTTCAAGGAAACGCCATTCTGATGAGTTTGAGCTTCATCAGGTGCCTGTTGTTGTGCAAGGGAGGAAAAAGAGGAGAAGGAAGCCAAGAGTTTGTAAGAGCAAAGAAGAAGCTGAGACGCAGAGAATGACACACATTGAAGTTGAAAGAAACCGCCGCAAGCAGATGAATGAGCATCTCGCCGTCCTCCGTTCACTCATGCCTGAATCCTACGTCCAAAGGGGTGACCAGGCCTCTATAGTGGGTGGTGCTATAGAATTTGTGAAGGAGCTTGAGCATCTTTTGCAGTCACTTGAAGCTAAGAAGTTGCAGATTCTGCAACAAGAAGTAGCACAAATTAATAATGAAGACTCTTCTTCTTCCATTTTCAAACTCATAAGTCCACCTTTTGCACAATTCTTTGCTTTTCCTCAGTACACATGGTCTCAGACTCCAACCAAATATCCTTCAAAAACTAAAGCAGCCATAGCAGATATTGAAGTTACTTTGATAGAAACACATGCAAACCTCAGAATTCTGTCAAGGAGAAGCCCCAGGCAATTGTCAAAGCTGGTCTCTGGTTTCCAAACTCTCTACCTCACAATCCTTCATCTTAATGTCAGCACCATTGACCCTTTGGTGCTTTATTCTATCAGTGCCAAGGTTGAAGAAGGATGCCACCTTGGTTCAGCGGAGGATATAGCGACAGCAGTTCATCACTTGCTGAGTAGAATTGAGGAGGAAGCTGCTTCACTTTGCTGTTGA 972 0.4342 MESDHSLQFVQLLLFSLVRSLEEGTMALLETLSSNELYNFIIHDTISATPFDSSSENRVVNHHPLLEHYDPASSSSSSRKRHSDEFELHQVPVVVQGRKKRRRKPRVCKSKEEAETQRMTHIEVERNRRKQMNEHLAVLRSLMPESYVQRGDQASIVGGAIEFVKELEHLLQSLEAKKLQILQQEVAQINNEDSSSSIFKLISPPFAQFFAFPQYTWSQTPTKYPSKTKAAIADIEVTLIETHANLRILSRRSPRQLSKLVSGFQTLYLTILHLNVSTIDPLVLYSISAKVEEGCHLGSAEDIATAVHHLLSRIEEEAASLCC 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0913 323 SMART finulus 122 173 IPR011598 GO:0046983
Lele49g0913 323 Pfam Helix-loop-helix DNA-binding domain 117 168 IPR011598 GO:0046983
Lele49g0913 323 Gene3D - 107 196 IPR036638 GO:0046983
Lele49g0913 323 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 116 167 IPR011598 GO:0046983
Lele49g0913 323 Coils Coil 164 184 - -
Lele49g0913 323 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 115 183 IPR036638 GO:0046983
Lele49g0913 323 CDD bHLH_AtFAMA_like 119 178 - -
Lele49g0913 323 PANTHER MAX DIMERIZATION, MAD 67 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0913 Lele-ChrLele49 5702694 5706006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0913 108 291 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 58.152 2.62e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele49g0913 HLH 7.9e-11 No_clan