Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0905 ATGGGTAGGGTTCCATGTTGTGGAGAGAGTAGCGGAGTGAAGAAAGGACCATGGACACCAGAAGAAGATGAGAAGCTAATGGAATATATCAGAAAGCGTGGCCATGGAAGTTGGAGGACACTTCCAAAGAATGCTGGTCTCAATAGGTGTGGCAAGAGTTGCAGGCTCAGGTGGACTAATTATCTGAGGCCCGATATCAAGAGAGGTAAATTCTCTGAAGAAGAAGAACGAATCATCATCAACCTTCATTCTGTTCTCGGAAACAAGTGGTCAAAGATTGCAGGCCATCTTCCAGGAAGAACAGATAATGAAATAAAGAACTACTGGAACACTCATATAAGGAAGAAGCTGCTTCAGATGGGAATTGACCCAGAAACTCACAAACCCAGAACTGACTTCAATCAACTCATCAATCTCTCTCACTTGCTTGGAATCGTCTCACCAAACAATATTGTGGCTCCATGGGGAAACAACAACAACAATCCTTTGGCTTCACAACTTGATCTCACTACTCAGTTAACCAAAATCCAACTTCAGAAAAACCTGTTACAAATTGCTAATTCAAACCCTTGCCTCTTAGGCAATAATAATCATCATACCCTCAACGTCCCACTTCATCAACTGCAATCTCTTTTTATTCGGACCACCGGTGTTCAAGAACATGCAAACCCAGATGGTTTATTATTCCCTCAAGCACACAGTGAGAATCACTATGGTACTTTAAAGTGGTCGGCTGACGTACAAGGAGGATCATCTGGTTTTAATAATGGTAGCAACATTTGGAATATTATTCCACATCAGAGCCAGTCGGAGATGACAATACCTGCTCTGGTCTCGGTGTCTCCGGTGACCAGCTCAGCCGTAAAGCAAACGGACGGTAGCCGCAATACAACTCAAGGGTCCACTGATCATCATCAGTCACCTAATTCCTCTAGAATGTTTGAGAGTTGGGAGAAGCTCCTGGATGATGAAATAACTGGTTCTGACTGGAACGAGATTCTTGAATTATCATCAACTTTGGCGTCGCCAATCTCGTGGTAG 1041 0.4352 MGRVPCCGESSGVKKGPWTPEEDEKLMEYIRKRGHGSWRTLPKNAGLNRCGKSCRLRWTNYLRPDIKRGKFSEEEERIIINLHSVLGNKWSKIAGHLPGRTDNEIKNYWNTHIRKKLLQMGIDPETHKPRTDFNQLINLSHLLGIVSPNNIVAPWGNNNNNPLASQLDLTTQLTKIQLQKNLLQIANSNPCLLGNNNHHTLNVPLHQLQSLFIRTTGVQEHANPDGLLFPQAHSENHYGTLKWSADVQGGSSGFNNGSNIWNIIPHQSQSEMTIPALVSVSPVTSSAVKQTDGSRNTTQGSTDHHQSPNSSRMFESWEKLLDDEITGSDWNEILELSSTLASPISW 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0905 346 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 285 - -
Lele49g0905 346 MobiDBLite consensus disorder prediction 285 313 - -
Lele49g0905 346 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lele49g0905 346 FunFam Transcription factor MYB39 70 131 - -
Lele49g0905 346 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Lele49g0905 346 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Lele49g0905 346 SMART sant 67 115 IPR001005 -
Lele49g0905 346 SMART sant 14 64 IPR001005 -
Lele49g0905 346 CDD SANT 17 62 IPR001005 -
Lele49g0905 346 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Lele49g0905 346 FunFam MYB-related transcription factor 14 67 - -
Lele49g0905 346 Gene3D - 14 67 - -
Lele49g0905 346 CDD SANT 70 113 IPR001005 -
Lele49g0905 346 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Lele49g0905 346 Gene3D - 70 117 - -
Lele49g0905 346 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Lele49g0905 346 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0905 Lele-ChrLele49 5654341 5656276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0905 1 344 MYB Transcription Factor Family AT3G02940 45.272 2.64e-85 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele49g0905 Myb_DNA-binding 4e-15 CL0123