Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0901 ATGGATGGAGAGAATAAGAGCAGTGGAGACGGCGGGGATCTCCAGATGGCGGCTCCGGCACCGGCGCCCATTTCTAATGCGAACGCTCCGCCGCCGTTCCTTAGTAAGACGTATGACATGGTGGATGACCCGGCCTCTGATGCGATCGTGTCTTGGAGCCCAACCAACAATAGCTTCGTGGTTTGGAACCCACCAGAGTTTGCCAGAGATCTCTTGCCCAAGTACTTCAAGCACAATAATTTCTCCAGCTTTGTGAGGCAGCTGAACACTTATGGTTTTCGGAAGGTGGATCCAGATCGATGGGAATTTGCAAATGAGGGCTTTTTAAGGGGTCAAAAGCACTTGCTTAAGAGTATTACTCGACGAAAACCTGCCCATGGCCATAATAATCAACAAACACAGCACTCAAATGGACAGAATTCATCAGTCGCTGCATGTGTAGAAGTTGGCATGTTTGGACTTGAAGAAGAGGTTGAGAGGCTTAAAAGAGATAAGAATGTGCTCATGCAAGAGCTTGTGAGGTTGAGGCAGCAGCAACAGACAACTGACAACCAGCTGCAGACAATGGTTCAGCGCCTTCAGGGAATGGAACAACGACAACAGCAAATGATGTCATTCCTTGCTAAGGCTGTCCAGAGCCCTGGCTTCTTTGCTCAGTTTGTACAACAGCAGAATGAGAGCAATAAACGCATAACTGAAGCCAACAAAAAACGGCGGCTTAAGCGGGAAGGTATTGCTGAAACAGAATGTACTCCTGCTTCTGATGGACAAATTGTTAAGTATCAACCTCTGATGAATGAAGCGGCAAAGGCAATGCTAAGGAAGATAATGAAATTGGATACTTCACAGCCAGAATCTTTTAATAACAACCATGATAACTACATGATTGGGGATGGTTCATCATCATCCAATGCAATGGACAGTTGTAGCTCTTCAAGCTGGACTTCTGGAGTTACACTTCAAGAGGTCCCGCCAACTTCATTGCAGTCTTCTCACATTCCAGCTGCGTCAGGAACTTCTGGGCCCTCAGCTGACAAATCCAAAATCCCATCTACAAAAACTACATCTGCTGTATCTGTTCCTCAGGTAGACGTCATGATACCTGAGCTTTCATCCATACCAGAGATGGTAACAGAAAGTATTCCCGATGTTCCTGGAGAGAATTATGTGAGACCTGCGATGGACAACACAGATCCTATTTCATTGGGAGTGAATGGGTCATTGCCCACTGATGTTGGTGGTATTTCTCCTGATGCAGACATTGATGAATTGTTACGCAATCCTTCCTTTTGGGATGATTTTCTTCTGCAAAGTCCATTGCCTGAGGATATCGAGATTAATGCTGGTGAAGCAGTAACCGACGAGGTGCAGGCAATGGAAGAAGGTTGGGACAAAACTGAACATATGAGCCAACTTACAGAGCAGATGGGTCTTCTTTCTTCTGATCCAAGAGCAGGTTGA 1461 0.4606 MDGENKSSGDGGDLQMAAPAPAPISNANAPPPFLSKTYDMVDDPASDAIVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKSITRRKPAHGHNNQQTQHSNGQNSSVAACVEVGMFGLEEEVERLKRDKNVLMQELVRLRQQQQTTDNQLQTMVQRLQGMEQRQQQMMSFLAKAVQSPGFFAQFVQQQNESNKRITEANKKRRLKREGIAETECTPASDGQIVKYQPLMNEAAKAMLRKIMKLDTSQPESFNNNHDNYMIGDGSSSSNAMDSCSSSSWTSGVTLQEVPPTSLQSSHIPAASGTSGPSADKSKIPSTKTTSAVSVPQVDVMIPELSSIPEMVTESIPDVPGENYVRPAMDNTDPISLGVNGSLPTDVGGISPDADIDELLRNPSFWDDFLLQSPLPEDIEINAGEAVTDEVQAMEEGWDKTEHMSQLTEQMGLLSSDPRAG 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0901 486 MobiDBLite consensus disorder prediction 283 358 - -
Lele49g0901 486 Pfam HSF-type DNA-binding 33 122 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele49g0901 486 ProSitePatterns HSF-type DNA-binding domain signature. 72 96 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele49g0901 486 SUPERFAMILY "Winged helix" DNA-binding domain 28 122 IPR036390 -
Lele49g0901 486 PRINTS Heat shock factor (HSF) domain signature 84 96 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele49g0901 486 PRINTS Heat shock factor (HSF) domain signature 33 56 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele49g0901 486 PRINTS Heat shock factor (HSF) domain signature 71 83 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele49g0901 486 Coils Coil 151 178 - -
Lele49g0901 486 MobiDBLite consensus disorder prediction 1 32 - -
Lele49g0901 486 Gene3D - 25 123 IPR036388 -
Lele49g0901 486 SMART hsfneu3 29 122 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele49g0901 486 FunFam Heat shock transcription factor 1 26 123 - -
Lele49g0901 486 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 25 316 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0901 Lele-ChrLele49 5621499 5624835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0901 1 480 HSF AT1G32330 54.767 9.13e-174 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele49g0901 HSF_DNA-bind 3.1e-33 CL0123