Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0896 ATGCGCGTGGTCACGGAGGATGAGGTCACGTGGTGGGGTGTGGGGAAAATGCGAAGGTTTGACTTTGCTGAAGAGGAAGAAGAAGAGGGGATGCTGATGAGAGGGAAGGAAGAGATCATGGAGAGTGGTTCTGGTAGCGAACAAGCCGAACAAGACAACAAGTCAGGGAACGATCAAGACAATGAACAACCATCCAACAAGAAGAAACGTTACCACAGGCACACTGCTCGTCAGATCCAAGAAATGGAAGCTTTGTTCAAGGAATGTCCTCACCCAGACGACAAACAAAGGATGAAACTGAGCCAAGATCTGGGCTTGAAGCCACGCCAAGTCAAGTTCTGGTTTCAAAATCGTCGAACTCAGATGAAGGCGCAACAAGATAGAGCTGATAATGTGATACTGAGAGCAGAAAATGAGAACCTGAAGAACGAGAACTATCGTCTACAAGCAGCTCTGCGTAATGTGATGTGTCCCAATTGTGGTCCGGCGATGATGGATGCTGAACTGGGCATGGATGATCATCATATTCGCCTTGAAAATGTTCGCCTCAGGGAAGAGTTAGAACGCGTTTGTTGTCTGACATCAAGATACACAGGCCGTGCAATGCAAGCAATGGCGTCGCCAGCTCCTTCTCTGTTGGCTCCTTCAGTGGACTTAGACATTAACATATACTCTAGGCACTTTTCTGATCCTGTTGCTTCTTGTACTTCCGAGATTATTCCTGTTCCAATGTTGCCGCCGCCTCCTTCCGATACTCCACCGTTCCCTGAAGGTGGCCTGTTGTTGATGGAAGAAGACAAGTCTCTGGCATGGGAACTCGCTGTGTCTTCCATGGATGAACTCGTCAAGATGTGTCAGGCAAACGAGCCGCTTTGGATCAGAAACAGTGAGAATATTGATAGGGAAATACTGAATTTTGAGGAGCATGCTAGGCTCTTTCATTGGCCTCTCAACCTCAAGAACCATTGTACTGAACTCAGAAGAGAAGCTAGCCGTAACACTGCTGTCGTTATAATGAACAGCGTCACTCTTGTTGACGCCTTCCTTGATGCTATGAAGTGGATGGAATTGTTCCCCACCATTGTTTCTAGGGCAAAAACTGTACAAATTATATCGTCTGGTGCTTCTGGTCATGCAAGTGGGTCTCTTCAACTGATATACGCAGAATTACAAGTGATTTCTCCATTGGTGCCCACTCGTGAGACTCACTTTCTTCGTTACTGCCAACAAAACGCCGAGGAGGGAACCTGGGCCATTGTTGATTTTCCTCTTGACAGCTTCCATGAAAATGTTCACCATTCTTATCCCAGATACTGCAGGCGACCCTCTGGCTGCATTATTCAAGACATGCCAAATGGCTACTCAAGGGTCACGTGGGTGGAGCATGCAGAGGTTGAAGAGAAACCAGTGCATCAGATATTCAGTAACTATGTGTACAGTGGAATGGCATTTGGAGCACAGCGTTGGTTAGGGGTTTTGCGGATACAATGTGAGAGGGTAGCCAGTCTCATGGCAAGGAATATCTCAGACCTTGGAGTGATACCGTCACCAGAAGCGAGAAAGAACTTGATGAAACTGGCGCAAAGAATGATAAGAACGTTTAGCTTGAACCTGAGCACGTCGAGTGGACAATCATGGACGGCGTTATCAGATTCTGCAGAAGACACTGTTAGAATTACAACGAGGAAGATTACAAACCCAGGGCAACCTAATGGAGTCATACTCAGTGCAGTATCCACCACATGGCTTCCTTATTCTCACTCCAAGGTCTTTGACCTTCTCAAGGACGAACGTCGCAGATCTCAGTTGGATTTTCTTTCCAATGGGAACTCTTTGCATGAAGTGGCTCATATTGCAAATGGCTCACATCCAGGAAATTGCATCTCGCTTTTGCGCATAAATGTGGCAAGCAACTCATCTCAGAACGTAGAGTTAGTGGTGCAAGAGAGCTGCACTGATCAGTCGGGGAGTGTAGTGGTGTACGCCACCATTGACGTGGAATCCATCCAGCTTGCCATGTCCGGCGAGGACCCTTCCTCCATAGCACTTCTTCCCCAAGGCTTCGTAATCGTTCCTGCAACAACCTCCGCCGCAGCCACCAAGGCCAATTCAACTGAATCCCCCGCCACCGCTGGAGCACCACCTTCTTCTACTACTCGGAACCAATCTTGTCTTCTCACATTGGGCCTCCAAGTCCTGGCCAGCACCATCCCTTCAGCGAAACTCAACCTCTCCAGCGTCACCGCCATTAACAACCATCTCTGCAACACTCTCCACCAAATCGAAGCCGCTCTTTGCACTGACAATTCCACTTATGTCGCTGAACCCACCACCACCACCACTGCAACCACCCTTAAGCAATAA 2364 0.4822 MRVVTEDEVTWWGVGKMRRFDFAEEEEEEGMLMRGKEEIMESGSGSEQAEQDNKSGNDQDNEQPSNKKKRYHRHTARQIQEMEALFKECPHPDDKQRMKLSQDLGLKPRQVKFWFQNRRTQMKAQQDRADNVILRAENENLKNENYRLQAALRNVMCPNCGPAMMDAELGMDDHHIRLENVRLREELERVCCLTSRYTGRAMQAMASPAPSLLAPSVDLDINIYSRHFSDPVASCTSEIIPVPMLPPPPSDTPPFPEGGLLLMEEDKSLAWELAVSSMDELVKMCQANEPLWIRNSENIDREILNFEEHARLFHWPLNLKNHCTELRREASRNTAVVIMNSVTLVDAFLDAMKWMELFPTIVSRAKTVQIISSGASGHASGSLQLIYAELQVISPLVPTRETHFLRYCQQNAEEGTWAIVDFPLDSFHENVHHSYPRYCRRPSGCIIQDMPNGYSRVTWVEHAEVEEKPVHQIFSNYVYSGMAFGAQRWLGVLRIQCERVASLMARNISDLGVIPSPEARKNLMKLAQRMIRTFSLNLSTSSGQSWTALSDSAEDTVRITTRKITNPGQPNGVILSAVSTTWLPYSHSKVFDLLKDERRRSQLDFLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQNVELVVQESCTDQSGSVVVYATIDVESIQLAMSGEDPSSIALLPQGFVIVPATTSAAATKANSTESPATAGAPPSSTTRNQSCLLTLGLQVLASTIPSAKLNLSSVTAINNHLCNTLHQIEAALCTDNSTYVAEPTTTTTATTLKQ 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0896 787 Pfam START domain 273 499 IPR002913 GO:0008289
Lele49g0896 787 MobiDBLite consensus disorder prediction 24 43 - -
Lele49g0896 787 MobiDBLite consensus disorder prediction 24 75 - -
Lele49g0896 787 FunFam Homeobox-leucine zipper protein HDG1 55 141 - -
Lele49g0896 787 CDD START_ArGLABRA2_like 267 498 - -
Lele49g0896 787 ProSiteProfiles START domain profile. 263 502 IPR002913 GO:0008289
Lele49g0896 787 MobiDBLite consensus disorder prediction 53 67 - -
Lele49g0896 787 SUPERFAMILY Homeodomain-like 53 126 IPR009057 -
Lele49g0896 787 ProSiteProfiles 'Homeobox' domain profile. 65 125 IPR001356 GO:0003677
Lele49g0896 787 SUPERFAMILY Bet v1-like 536 762 - -
Lele49g0896 787 SMART HOX_1 66 129 IPR001356 GO:0003677
Lele49g0896 787 SUPERFAMILY Bet v1-like 264 500 - -
Lele49g0896 787 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 63 765 IPR042160 -
Lele49g0896 787 SMART START_1 272 499 IPR002913 GO:0008289
Lele49g0896 787 Coils Coil 124 154 - -
Lele49g0896 787 Gene3D - 52 136 - -
Lele49g0896 787 CDD homeodomain 68 126 IPR001356 GO:0003677
Lele49g0896 787 Gene3D - 318 485 IPR023393 -
Lele49g0896 787 Pfam Homeodomain 68 123 IPR001356 GO:0003677
Lele49g0896 787 ProSitePatterns 'Homeobox' domain signature. 100 123 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0896 Lele-ChrLele49 5590106 5595670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0896 47 765 Homeobox Transcription Factor Family AT5G46880 60.372 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele49g0896 START 2.7e-41 CL0209