Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0895 ATGGCCTCATCCTCTTGCCACGACACAGAACTCACAGATAACGCCGTCGTTATGAAATTACCCGAAATGCCCTTCAAGTTACTGGAACTCAATAATAACGGTGTTCATATTTTGAAGTATAAAACTATAAATTATCCCTTCCGTGCTTTTTTTCGGTTTTCTAAGCATTCGTTTCTTCTCTCTCCTCATCCACTGTTTTTCTCTGTTTCATACAGCGCCGGACAACCTCTTCCACCGGCCGGTAGGATAATACCATTACCGGTGGCCATATTTTGTCACTCCAGAGCAAGCCGCTTAGCACTTCCCAATCGGCGCATTTTTATTTTCATTTTCTTCCTCGCGGTTGGTCGTTGTGTAAAGCCGGATACCTACAAGGAGCGACTTCGTAATGAAATGGTGGAAAGAAGACTTTCTTTATCTAAGGAAGCTAGACATGGGCTAGAATTTTTGAAGCGTAAAAGGCTTCAACGGGCAAAACTCATTACTGCCTCAGAAACAACTGTTGCTAGCACAATGACTAGAAGTGGAGGAGATGCTTTAAGAGCTTCAGCTTCGTGTGGTGGTGGTGTCAGATTTCATGGCAATACAGACGTCTTCTCAAAGCGGAAGGTGGATAAGTTTGAGACAAGTGATCTTGAATGGACTGAGAAAATTCCAGAATGTCCTGTTTATTGTCCAACAAAGGAGGAATTTGAGGATCCTCTGGTTTACTTGCAAAAGATAGCTCCAGAAGCTTCAAAATATGGTATATGCAAGATTATTTCACCTTTGAGTGTGTCTGTTCCTGCTGGAGTTGTTTTAATGAAGGAGAAAGCGGGATTCAAGTTTACAACTAGAGTACAGCCTCTTCGGCTTGCTGAGTGGGACACTGAAGACAAAGTCACATTTTTCATGAGTGGAAGCAATTATACATTCCGTGATTTTGAGAAAATGGCGAATAGAGTTTTTGCACATAGATATTCTAGTGCTGGATGTCTTCCTGCCGCATTTTTGGAAAAGGAGTTTTGGCATGAAATTGCTTGTGGACAGATGGAAACTGTTGAATATGCATGTGATGTTGATGGTAGTGCCTTTTCATCTTCTCCTACCGATCAGCTTGGGAACAGCAAATGGAATTTAAAGAAAGTTTCACGGTTGCCCAAGTCCGTTTTGCGCCTCTTGGAAACAGCAATTCCGGGAGTAACAGAACCCATGCTGTACATTGGAATGCTCTTTAGTATGTTTGCTTGGCATGTGGAGGATCATTATTTGTACAGTATAAATTATCAACACTGTGGTGCATCAAAAACTTGGTACGGCATTCCAGGTCATGCAGCATTGGATTTTGAAAGGGTGGTGAGAGAGCATGTGTACTCTAAAGATATTCTTTCTAATGATGGGGAGGATGGAGCTTTTGATGTTCTTCTGGGGAAAACAACTCTGTTCCCTCCAAATATTTTGTTGGATAATGACGTCCCTGTCTATAAGGCTGTTCAAAAGCCAGGGGAGTTTGTAATAACTTTTCCTAGAGCATATCATTCTGGATTTAGTCATGGTTTCAACTGTGGAGAAGCAGTGAACTTTGCAATTGGTGATTGGTTTCCTTTAGGAGCTATTGCTAGCCAGCAATACGCGCTTCTTAACAGGATGCCCCTGCTACCTCATGAAGAACTTCTATGCAAAGAAGCAATGCTCCTTCATACAAACTTAGAACTTGAAGATTCAGACTTTCCCTCTGCAGATCTGTTGACTCATAATTGCATAAAGATTTCATTTGTAAATCTAATGCGCTTTCAGCATTGTGTTCGTTGGCTCCTAATGAAATCGAGGTCTTGTTCTAGTGTTTTTCCACATTCCCACACCACAATTCTCTGTAGCCTCTGCAAACGCGATTGTTATGTTGCATATTTAGATTGCCAGTGTCACATGCACCCGGTGTGCCTTTGCCATGATATTGAAGCTCTTGACTTAACCTGTGGGAGCGAGCACACTCTTTATGTGAGGGAGGATATTAGTGATCTGGAAGCTGCAGCCAAGAGGTTTGAGCAGGGAGATGGAATCGTGGATGAGATTCTTAAGCAAACCAAGGGTGACAATAACATGTATTCATATCCTTTGTCAAATATGTTTCAGAGAGCTGAAGCAAATGGATATACTACTTATTGCGAGATAGAATTTGATCCTGTTATTGAACATTATTCAACCACAGATCAGGCAAGAAGTAATACAGAGCGCAATTTACAAAGTCAACTTGTTTTGAGGCACTGCCCAGATATTAAACCAGAAGTCTGCGAGGCCTCGTTTTCTTCTGCTGCATCCACCCTGTGTTCTCTTTCAGAACCTATTGATAGGTCTTCTGCTCTAAAAAATGACGATGGGCATGCTTATTTTACTTCTGGCTCTATTGATTCTGAAGGATGTTGTGAAGGAGTATCAAATGGCGCATACCAATCTTTACTATCCTCTGCGCGCTATCATGAAATCTCAAGTAAACCTCAATGCAATCGCGATGAATTAGAGATGATGCCCATTGTGGATAAAGAGGATGACGATTCTGATTCAGAAATATTTAGGGTAAAGCGGCCATCTTCTCTGAAGGCAGAGAAGAGAAATTTGAATGCCACCACGTCTTCCAAGCATTCGGACCAACAGCAGGGGCTTAAACGATTGAAGAAAGTCAACGAAGGAAGTAGCCCGCCACAGCCAATGGATTGCAGCAGAAGCAATGATTCAAGTAACAAATTCAATGAGCCGATGAAACGGAAATTTGAGGGTGAAAGATCGGTGAAGGACAAATTTGGAGGGGGAAATAACATTCCCATATCTGTGAGGTATAAGAAGCTGGGCAATGAGGGAGTTAGTAGGGAGCGAGATCAGCACAGGAAATATAGGGAGCGACCTCCCTTTGAGATGGGGCCGAAGCGCCTTAAAGTGCGAGGCCCTTCGTTCTTGAGCTTAGAGAGTCCTGGTTTTGCCTCTAAATGCCATCCTGCAAGCTAG 2979 0.4256 MASSSCHDTELTDNAVVMKLPEMPFKLLELNNNGVHILKYKTINYPFRAFFRFSKHSFLLSPHPLFFSVSYSAGQPLPPAGRIIPLPVAIFCHSRASRLALPNRRIFIFIFFLAVGRCVKPDTYKERLRNEMVERRLSLSKEARHGLEFLKRKRLQRAKLITASETTVASTMTRSGGDALRASASCGGGVRFHGNTDVFSKRKVDKFETSDLEWTEKIPECPVYCPTKEEFEDPLVYLQKIAPEASKYGICKIISPLSVSVPAGVVLMKEKAGFKFTTRVQPLRLAEWDTEDKVTFFMSGSNYTFRDFEKMANRVFAHRYSSAGCLPAAFLEKEFWHEIACGQMETVEYACDVDGSAFSSSPTDQLGNSKWNLKKVSRLPKSVLRLLETAIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYQHCGASKTWYGIPGHAALDFERVVREHVYSKDILSNDGEDGAFDVLLGKTTLFPPNILLDNDVPVYKAVQKPGEFVITFPRAYHSGFSHGFNCGEAVNFAIGDWFPLGAIASQQYALLNRMPLLPHEELLCKEAMLLHTNLELEDSDFPSADLLTHNCIKISFVNLMRFQHCVRWLLMKSRSCSSVFPHSHTTILCSLCKRDCYVAYLDCQCHMHPVCLCHDIEALDLTCGSEHTLYVREDISDLEAAAKRFEQGDGIVDEILKQTKGDNNMYSYPLSNMFQRAEANGYTTYCEIEFDPVIEHYSTTDQARSNTERNLQSQLVLRHCPDIKPEVCEASFSSAASTLCSLSEPIDRSSALKNDDGHAYFTSGSIDSEGCCEGVSNGAYQSLLSSARYHEISSKPQCNRDELEMMPIVDKEDDDSDSEIFRVKRPSSLKAEKRNLNATTSSKHSDQQQGLKRLKKVNEGSSPPQPMDCSRSNDSSNKFNEPMKRKFEGERSVKDKFGGGNNIPISVRYKKLGNEGVSRERDQHRKYRERPPFEMGPKRLKVRGPSFLSLESPGFASKCHPAS 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0895 992 MobiDBLite consensus disorder prediction 844 860 - -
Lele49g0895 992 SMART JmjN_1 220 261 IPR003349 -
Lele49g0895 992 MobiDBLite consensus disorder prediction 892 906 - -
Lele49g0895 992 MobiDBLite consensus disorder prediction 838 969 - -
Lele49g0895 992 SMART cupin_9 365 538 IPR003347 -
Lele49g0895 992 FunFam Lysine-specific demethylase isoform A 216 565 - -
Lele49g0895 992 Gene3D Cupin 214 543 - -
Lele49g0895 992 Pfam jmjN domain 222 254 IPR003349 -
Lele49g0895 992 ProSiteProfiles JmjN domain profile. 221 262 IPR003349 -
Lele49g0895 992 PANTHER LYSINE-SPECIFIC DEMETHYLASE 213 908 - -
Lele49g0895 992 SUPERFAMILY Clavaminate synthase-like 359 554 - -
Lele49g0895 992 Pfam C5HC2 zinc finger 618 669 IPR004198 -
Lele49g0895 992 ProSiteProfiles JmjC domain profile. 368 538 IPR003347 -
Lele49g0895 992 Pfam JmjC domain, hydroxylase 398 521 IPR003347 -
Lele49g0895 992 MobiDBLite consensus disorder prediction 861 876 - -
Lele49g0895 992 MobiDBLite consensus disorder prediction 907 924 - -
Lele49g0895 992 MobiDBLite consensus disorder prediction 942 966 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0895 Lele-ChrLele49 5568880 5576527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0895 218 557 JUMONJI Transcription Factor Family AT2G34880 37.343 4.46e-62 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Lele49g0895 JmjC 2.4e-38 CL0029