Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0894 ATGGAGCTATTCCCAGCACAGCCAGATTTGTCTCTGCAAATCAGCCCTCCAAACACCAAACCAAGTTCTAATTGGAGGAAAGATAATAATAATGGTGGCGACTTGGATTTGGGGTTCTGGAAGAGAGCTTTGGACTCCTCAAACTTTTCAATGCCCAAATCCAAAGCTTCTTCTGATAATCTTATTCATCATAACTCCACCTTCGACCTCTCTCTCTCCTCCTCCAATATTACTTCCACCGGACTTCCTTCTTCATCTTCTTCACTCTACAACAACAACTCTAACCTCATCGGTAACATCCATCACAACCACCACCACCATTTACTCCAAAACGGCAACAATAATGCCAATCCCTTGCCGTCACCGTCGTCGTTTCACTACTCCCACCACCACCACCACAGTCTCGGCTTTCTCAAGCCTATCAGAGGAATTCCTCTCTACCAAAACCCTCCTCATCCTCATCCTCATCCTCATCCTCCGGCTTCTGCTAACATCCCATTTGGTGCTCTTGTTGATGCTCATAACTATTCCACTACTGTTAATCCTCCTCCTCCTCCTTCATCTCTATCTAACATTAACAATATGACCTCTTCAACAACTTCGTCGAGCCCCTTTCGATCTCACCAAGGTTTGATAGGGTCTAGGTTGTTGTCTCGTTTCCCTGCTAAACGTAGCATGAGAGCTCCTCGCATGCGTTGGACTACCACCCTCCATGCTCGCTTTGTTCATTCCGTTGAGCTTCTCGGCGGCCATGAAAGGGCAACACCAAAATCAGTTCTTGAGCTAATGGATGTGAAGGATCTCACTTTAGCTCATGTTAAATCTCATCTACAGATGTACCGAACGGTGAAAACCACAGATAAAGCAGCTGCTTCCTCAGGGCAATCTGATGTATATGATAATGGATCATCTGGAGATAATTCTGAAGATTTCATGTTTGACATGAAGAATTCATCAAGAAGGTCTGATCTATCCTCTACCAAGCAAGCAAAAGAAGGTGCTAATCGTGATCAAGAACATCATCATCATGGGCTTTGGAGCAACTCTTCCAGGGAAGCTTGGTTGCATGGGAAGCCAAAGCTGGATTATTGTGCAGGAAACTTGAGTTCTTTTCAGAAGGAAATGGATCCAACAAAATGCCTAAGTTACGAGAGAGTATCAGATGGAAGTGCATCGTCAGATCTTTCAGGAACAAGCCCCAAGAAACCAAATTTGGATTTGGAGTTTAGTTTAGGGCAGCCACTTTGA 1248 0.4463 MELFPAQPDLSLQISPPNTKPSSNWRKDNNNGGDLDLGFWKRALDSSNFSMPKSKASSDNLIHHNSTFDLSLSSSNITSTGLPSSSSSLYNNNSNLIGNIHHNHHHHLLQNGNNNANPLPSPSSFHYSHHHHHSLGFLKPIRGIPLYQNPPHPHPHPHPPASANIPFGALVDAHNYSTTVNPPPPPSSLSNINNMTSSTTSSSPFRSHQGLIGSRLLSRFPAKRSMRAPRMRWTTTLHARFVHSVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKAAASSGQSDVYDNGSSGDNSEDFMFDMKNSSRRSDLSSTKQAKEGANRDQEHHHHGLWSNSSREAWLHGKPKLDYCAGNLSSFQKEMDPTKCLSYERVSDGSASSDLSGTSPKKPNLDLEFSLGQPL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0894 415 MobiDBLite consensus disorder prediction 142 208 - -
Lele49g0894 415 MobiDBLite consensus disorder prediction 385 400 - -
Lele49g0894 415 MobiDBLite consensus disorder prediction 286 324 - -
Lele49g0894 415 MobiDBLite consensus disorder prediction 286 346 - -
Lele49g0894 415 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 229 282 IPR006447 GO:0003677
Lele49g0894 415 MobiDBLite consensus disorder prediction 384 415 - -
Lele49g0894 415 MobiDBLite consensus disorder prediction 146 162 - -
Lele49g0894 415 MobiDBLite consensus disorder prediction 190 208 - -
Lele49g0894 415 SUPERFAMILY Homeodomain-like 226 282 IPR009057 -
Lele49g0894 415 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 414 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lele49g0894 415 FunFam Myb family transcription factor 227 285 - -
Lele49g0894 415 MobiDBLite consensus disorder prediction 325 346 - -
Lele49g0894 415 MobiDBLite consensus disorder prediction 11 30 - -
Lele49g0894 415 Gene3D - 228 285 - -
Lele49g0894 415 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0894 Lele-ChrLele49 5551629 5556135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0894 1 414 G2-like Transcription Factor Family AT4G17695 37.349 1.59e-55 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele49g0894 None None None