Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0889 ATGGGTAGCGGTGACATGGATAAAACTCCAAAAGAGAAGGAGCCAAAGACACCTCCGGCTATGTCACAGGAGCACTCTTCAACTCCTGGCACTGGAACAATTAATCCTGATTGGTCCAGCTTTCAGGCATATTCTCCAATGCCTCCACATGGGTTCTTAGCATCAAGTCCCCAAGCTCACCCATATGTGTGGGGTGTCCAGCATATTATGCCTCCTTATGGTACCCCACCACATCCATATGTTGCAATGTATCCTCATGGTGGTATATATGCTCATCCATCTATGCCTTCGGGATCTTATCCTTTTAGTCCTTTTACCATGCCTTCTCCGAATGGTATAGCTGAGCCTTCAGGCAATACTCTTGGCAACATGGAAACTGATGGTAAGCCTCCTGAGGTGAAGGAAAAATTGCCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATGTGATTACAGGAAAGAATGTTGAACATAGTAAAACACCAGGGACATCTGCTAATGGAGTTCATTCAAAAAGTGGTGAAAGTGCAAGTGAAGGTACTAGTGAAGGAAGTGATGCAAATTCTCAGAATGACTCTCAGCTGAAATCAGAGGGAAGGCAGGACTCTTTGGGAGCTGAACCATCTCAAAATGGAGGTTCGGAGCATGCTTCTCAAAATGGGGGACTTAACACACCTCACAATATGGTCAATCAACCTATGAGTATCATGCCTATCTCTGCTGCAGGTGCTCCTGGTGGAGTTGGTCCCACAACAAATTTAAATATAGGAATGGATTATTGGGGTGCACCCGCTTCATCCACTATTCCTGCAATGCGTGGAAAGGTTCCTTCTACTGCTGTTGCTGGAGGAATGGTTACTGCCGGATCACGGGAGAGCGTTCAGTCACAACTTTGGCTGCAGGATGAAAGAGAACTAAAGAGACAAAGGCGGAAGCAGTCTAATAGGGAATCGGCTCGCAGGTCTAGGTTGCGCAAGCAGGCTGAATGTGATGAACTAGCCCAGCGGGCAGAGGCTTTAAAAGAAGAGAATGCTTCTCTCCGCTCTGAAGTGAACCGGATAAGGAGTGAGTACGAGCAGCTGCTCTCAGAAAATGCTGCCCTCAAGGAAAAACTTGGGGAATCACCTGAGAATGAGGAGCATAGGCCTAGCCGGAATGGCCAACGTGTGGATAGTGATGTTCAACACATGGAGCAGACAGAAGCCGTGCAGGGCGGTCATTAA 1227 0.4703 MGSGDMDKTPKEKEPKTPPAMSQEHSSTPGTGTINPDWSSFQAYSPMPPHGFLASSPQAHPYVWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPSMPSGSYPFSPFTMPSPNGIAEPSGNTLGNMETDGKPPEVKEKLPIKRSKGSLGSLNVITGKNVEHSKTPGTSANGVHSKSGESASEGTSEGSDANSQNDSQLKSEGRQDSLGAEPSQNGGSEHASQNGGLNTPHNMVNQPMSIMPISAAGAPGGVGPTTNLNIGMDYWGAPASSTIPAMRGKVPSTAVAGGMVTAGSRESVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVNRIRSEYEQLLSENAALKEKLGESPENEEHRPSRNGQRVDSDVQHMEQTEAVQGGH 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0889 408 SUPERFAMILY Leucine zipper domain 307 363 IPR046347 GO:0003700|GO:0006355
Lele49g0889 408 MobiDBLite consensus disorder prediction 20 41 - -
Lele49g0889 408 MobiDBLite consensus disorder prediction 371 397 - -
Lele49g0889 408 MobiDBLite consensus disorder prediction 305 330 - -
Lele49g0889 408 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Lele49g0889 408 MobiDBLite consensus disorder prediction 116 233 - -
Lele49g0889 408 MobiDBLite consensus disorder prediction 367 408 - -
Lele49g0889 408 MobiDBLite consensus disorder prediction 1 19 - -
Lele49g0889 408 Pfam bZIP transcription factor 304 366 IPR004827 GO:0003700|GO:0006355
Lele49g0889 408 Gene3D - 307 361 - -
Lele49g0889 408 Coils Coil 324 372 - -
Lele49g0889 408 MobiDBLite consensus disorder prediction 146 233 - -
Lele49g0889 408 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 391 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lele49g0889 408 SMART brlzneu 304 368 IPR004827 GO:0003700|GO:0006355
Lele49g0889 408 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 306 369 IPR004827 GO:0003700|GO:0006355
Lele49g0889 408 MobiDBLite consensus disorder prediction 1 41 - -
Lele49g0889 408 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 311 326 IPR004827 GO:0003700|GO:0006355
Lele49g0889 408 Pfam Disordered region downstream of MFMR 135 271 - -
Lele49g0889 408 CDD bZIP_plant_GBF1 309 359 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0889 Lele-ChrLele49 5494407 5499669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0889 1 387 bZIP Transcription Factor Family AT2G35530 63.840 7.99e-164 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele49g0889 MFMR_assoc 7.9e-57 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0889 49 5494407 5499669 Lele49g0889 49 5494407 5499669 ECH
Lele49g0889 49 5494407 5499669 Lele51g0905 51 5566384 5572379 hybridization
Lele49g0889 49 5494407 5499669 Lele52g0914 52 5906011 5911302 hybridization