Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0875 ATGGCGACGACTGTGAGCAATCACTTGGACTGCAATGAGCCAGAATTCGAGAGCCGTAGTAACTGTCGAATCTCAGAAATCCATAAGCAAATTACTGAATGTGGTGTGAGTCTGGCTTTTACTTTACATGAAAAAGTTAGAGAGCTGCAGCCATTGCGCATTCCAGTTATTGGAGTTCCCGAAAATTTCAAGGACTTGAAATTCTCTGATTACTCAGTTTTTTATAAACTTGTTTCTGGTAACTCGGGTTTGTTTCCGAGGCCGGTTATCAAACAAGAAGATAAGGCTGCTATACTGTATTCTTCTGGGACTACGGGTGTGAGTAAAGGAGTTGTTCTAACACATGAGAATTTTGTTTCTATGGTTGAGCTTTTCGTGAGGCTTGAAGCTTCTCAATATGAATATTCAAGCTCGAAGAATGTGTTCCTTTCTGTTCTGCCAATGTTCCATGTATATGGTTTATCACTCTTTGCAACAGGATTACTGTCATTAGGCTCTACGATTATTGTAATGAAAACATTTAACATCAATGAAGTGATTAAGGTGATTGATAATTACAGAGTCATACACTTCCCTGTTGTTCCATCAACTTTGATAGCATTGACAAAAAGGATAACCAGTATAAATAGAAGTTACCTGCTAAGTTTGACTCAGGTAAAAAGCACTTTTCACATGTACATCTTGAACCAATGGCTTGCTCACAAAGGCATTCCATTTTGCAAAGCTCAGTCGTACCCATCGAAGGTGTTTGGGCTATTGCATTTGGTTGTCTCCTTGGGACTTATTCTTGCGATGGACAATTATCTTAAGAAAGCCTTCGTGGCTGCTGCGATTAAATTCCCTAGTGCACTGTTTGGGATGTTTTGTATATTCTCCGTTTTGGTTATTCTTGATTCCACTGTTCCATCTGCAGCCACAGCCTTGATGAACTTCTTCGAACCGGCGCTTTTGTTCATTCAGAGATGGCTCCCCTTGTTCTATGTTCCATCTTTGGTTATCTTGCCCCTTTCTGTTAAAGATATTCCAGCTGCTTCGGGCATCAAGATTAGCCTTATCATAGTTGGAGGTTGGCTAGCTACACTATTGGTTGCTGGTTTCACAGCTATAGCAGTAAGAAAAGCTGTGAAGACAGAAATGATTGATGCTGAGCCTATGAAAAAACCCTCTCCATTTTCTGCCCTTGAAGTGTGCGCTTGGACTGGGATTCTTCTTGTCTCATTTGTGTCTGCACTATTTTATCCAACTGCACTGGGGACAAGTGCCAGAACCTGTCTTCCTTTCTTACTTGCGTCCACAGTGTTAGGCTACATGGTCGGTTCTGGGTTGCCATCAGATGTAAGGAAAGTATTTCATCCAATCATTTGCTGTGCGCTTTCAGCAGATCTGACAGCTTTGGCTTTTGGATATGTTTCGAAGTTGGGGTTTCAACCTGTTCTAGGATATTACCTTACAAAGGTATCCTCTAACCCTGGAGCTGGTGACATTTTAATGGCATTTTTGGGATCTGTCATTCTCTCTTTTGCCTTCTCTATGTTCAAACAAAGAAAGCTTGTAAAAAGGCATGCAGCTGAGATTTTCACCTCTGTCATAGTCTCAACCGTATTCTCCTTGTACTCAACTGCTCTTGTCGGACGTCTCGTGGGATTAGAGCAATCTTTAACCGTTTCCATTCTACCCAGATGTATAACTGTTGCATTGGCCCTTAGCATTGTGTCTTTATTTGAAGGTACCAATTCATCTCTGACCGCAGCTGTGGTTGTAGTAACTGGTCTGGTTGGAGCAAATTTTGTGCAAGCAACGCTTGACCAATTTCGCTTTCGCGATCCAATTGCTCGAGGAATTGCAACCGCATCTAGTGCTCATGGACTTGGAACAGCAGCACTGTCCGCAAAGGAACCTGAGGCTCTGCCATTTTGTGCGATTGCTTATGGTCTGAATGGTATCTTTGGATCTATTCTTTGTTCCATTCCTCTTGTTAGACAAAGCTTGCTTGCTGTTGTTGGCTGA 2007 0.4205 MATTVSNHLDCNEPEFESRSNCRISEIHKQITECGVSLAFTLHEKVRELQPLRIPVIGVPENFKDLKFSDYSVFYKLVSGNSGLFPRPVIKQEDKAAILYSSGTTGVSKGVVLTHENFVSMVELFVRLEASQYEYSSSKNVFLSVLPMFHVYGLSLFATGLLSLGSTIIVMKTFNINEVIKVIDNYRVIHFPVVPSTLIALTKRITSINRSYLLSLTQVKSTFHMYILNQWLAHKGIPFCKAQSYPSKVFGLLHLVVSLGLILAMDNYLKKAFVAAAIKFPSALFGMFCIFSVLVILDSTVPSAATALMNFFEPALLFIQRWLPLFYVPSLVILPLSVKDIPAASGIKISLIIVGGWLATLLVAGFTAIAVRKAVKTEMIDAEPMKKPSPFSALEVCAWTGILLVSFVSALFYPTALGTSARTCLPFLLASTVLGYMVGSGLPSDVRKVFHPIICCALSADLTALAFGYVSKLGFQPVLGYYLTKVSSNPGAGDILMAFLGSVILSFAFSMFKQRKLVKRHAAEIFTSVIVSTVFSLYSTALVGRLVGLEQSLTVSILPRCITVALALSIVSLFEGTNSSLTAAVVVVTGLVGANFVQATLDQFRFRDPIARGIATASSAHGLGTAALSAKEPEALPFCAIAYGLNGIFGSILCSIPLVRQSLLAVVG 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0875 668 Pfam AMP-binding enzyme 25 203 IPR000873 -
Lele49g0875 668 ProSitePatterns Putative AMP-binding domain signature. 98 109 IPR020845 -
Lele49g0875 668 SUPERFAMILY Acetyl-CoA synthetase-like 24 214 - -
Lele49g0875 668 Pfam LrgB-like family 432 656 IPR007300 -
Lele49g0875 668 PANTHER PUTATIVE SEROTONIN TRANSPORTER 240 665 IPR007300 -
Lele49g0875 668 Gene3D - 115 221 - -
Lele49g0875 668 Gene3D - 25 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0875 Lele-ChrLele49 5402647 5407495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0875 24 221 Monolignol Biosynthesis Gene Families AT4G19010 52.000 5.50e-59 206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0875 49 5402647 5407495 Lele51g0892 51 5480628 5486503 hybridization
Lele49g0875 49 5402647 5407495 Lele52g0892 52 5785486 5789068 hybridization