Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0865 ATGTGGACCGGACTCCAGCCACCGCTATTCACGGTGGCCCAGTGGCATGAGCTTGAACACCAAGCTCTAATCTTTAAGTACCTCAAAGCCGGATTATCCGTTCCCCCTGACCTTCTCGCTCCGATTCACAAGAGCCTCCAATTGATGCCGGTTCCTCATTCAGCTCTGGGCTACAGCTCCTACTTCGGGAAGAAGATAGACCCAGAACCGGGACGATGCCGGAGAACCGACGGCAAGAAATGGAGGTGCTCAAGAGACGCACACGCAGATTCTAAGTACTGTGAGCGACACATGATTCGCCGTCGTCATCGTTCAAGAAAGCCTGTGGAAACATCACAAGCGACCCAACCTCCTGCTCAGTCATCGGAGGTTAGTGGTGGGACCAAAAGTGGTGTTGGACACTCATTTCCCAGCCTGCCTCTGCACACAAATGGCACCCGTGAAGGTATAAACCTCGGAGGAAACAACAAATCTCAGCTCCAGATTGAATCTCTTCCCAGTGAGATGAACAAGAAAGAGTATAGGTATGATGATAATAATAATAATAATAATAGTATAGCTTCTTGTGAGTTAGTCCTAGACTCTCTGGAGTCGTTTTTTGTTTGTGTGGATGATGTTTTTGGTGACAGGGACAACATTTTTGACTTGTTGTATGAGGTAGCTGTAGAATCTTCTCGATTTTACAAGTCTGGTTTCAATGTTTGCAATGCTTTTAACTCGACATTTCATTTTAGAACCAACAAATGGGTGTTGGGGAAAGGAAAACACAGTTCTCGACATTGTCTAAAGTTTGGACTGCAATCTGAAATAGATGAGCATGACTTCCTTCAGAAAGACATAGGAAATGTGAGGTACCTTGGTTTTGACTCTTCCTCAGACAGCATGTGGTCTCAACTGTCTCACATTTCCTCCAATGCTGTCTCTGAATCGAGCGATAGTTCTGTCATGGCTAGCAACTGCTTTCAACTGCAAGGAATGCCGGATGCTGAGCCGCCAGCGTCGAACATTGATGCCGTGACGTCCAAGCAACTCGTTTTCAGTGGCCAGTTAGGTTCAACTGATTGCTTGAAACAGGACTATCAGTCGTCTCAGACTCTGATCAATGCTTGGCCATGGAAGAAGGAGTTAGGCTCACCGCCGGTGATGGATTACAGACCGAAGAAGGATGCTCTCTATGCGCAGGCCAAAGCAGAGACTGTTGAAGAAGGATCATCTGACTTTTAG 1224 0.4681 MWTGLQPPLFTVAQWHELEHQALIFKYLKAGLSVPPDLLAPIHKSLQLMPVPHSALGYSSYFGKKIDPEPGRCRRTDGKKWRCSRDAHADSKYCERHMIRRRHRSRKPVETSQATQPPAQSSEVSGGTKSGVGHSFPSLPLHTNGTREGINLGGNNKSQLQIESLPSEMNKKEYRYDDNNNNNNSIASCELVLDSLESFFVCVDDVFGDRDNIFDLLYEVAVESSRFYKSGFNVCNAFNSTFHFRTNKWVLGKGKHSSRHCLKFGLQSEIDEHDFLQKDIGNVRYLGFDSSSDSMWSQLSHISSNAVSESSDSSVMASNCFQLQGMPDAEPPASNIDAVTSKQLVFSGQLGSTDCLKQDYQSSQTLINAWPWKKELGSPPVMDYRPKKDALYAQAKAETVEEGSSDF 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0865 407 Pfam QLQ 10 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele49g0865 407 PANTHER GROWTH-REGULATING FACTOR 5 9 238 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lele49g0865 407 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele49g0865 407 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele49g0865 407 MobiDBLite consensus disorder prediction 94 161 - -
Lele49g0865 407 MobiDBLite consensus disorder prediction 110 161 - -
Lele49g0865 407 ProSiteProfiles WRC domain profile. 67 111 IPR014977 -
Lele49g0865 407 Pfam WRC 68 110 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0865 Lele-ChrLele49 5352585 5356751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0865 8 113 GRF Transcription Factor Family AT3G13960 58.407 4.82e-38 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lele49g0865 WRC 2.2e-19 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0865 49 5352585 5356751 Lele51g0882 51 5418062 5420261 hybridization
Lele49g0865 49 5352585 5356751 Lele52g0879 52 5709495 5711791 hybridization