Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0863 ATGAAGCCTGGCCTTCCACGTGGCAAAATCTGGGTGTTGATCATCTTCTCAAGCCACCATATCTCTTTTCAGATTCTGAAGAAAAACTATTCATCATCAATTTCAATGGCAGCTTCAAGCTCTCTTCTTCTAAAGTTGGAGCAGATTCCAGGTAAAGGAAGAGGTTTAGTTGCAGCTCAGAATCTGAAAGCTGGCCAAATCGTCCTCACTGAATCTCCCATCATTCTATACTCCACTTTCTCTCTCTTCTCCGAATCATCTTCTTCTTATTCTTACTGTGACCACTGCTTCAGATCAATCTTACCACCTTCAACCTCATATTCATGCCCCTCTTGTTCTCGCCACAATTTCTGTAGCCAGAAATGTCTCTCTCTTGCTCTCAAATCCTCTCACTCTTCATGGGTGTGTCACGCTCTGTCTTCTCTTCGAAACTCTGGTTCAGATCTTCTTCGTCAATCCCATGAACTTCAAGTTCAAGCTCGCTTCGTTGTCGCTGTTTGTAACCTTTCTCTTCTTTCCCCTTCCAGTATTGAGATCATGCTTTCTCTTATGGGAACCCCAGATGACGCCATTGTTGAAGCTTCAAGCTTTCTTCACTCTCTTATCTCTTCTCTGTGCCCCCCACCACCACCTCAGGATCATCATCAGCTATCTGCAGAACTCACAGCTCAACTCATGGCTAAAGATAGGCTTAATTCTTTCTGCCTAATGGAACCTTATTCACCAGATGGTCCTCAGAGATCCATCAAGGCGTATGCTATATACCCAAAAGCAACTTTCTTTAACCATGATTGTCTTCCGAATGCATGCAGATTCGATTGTGTAGATGATGGTGCTCCTGGTGGAGATGAACACAACACAAACATTGTGATAAGGATGATTGAGGATGTTGCGGAAGGGAGAGAAGTTTGCATAAGCTATTTCAGAATCAATAGGGATTATTCAACGAGGAAGAAGATCTTGATGGAAGATTATGGATTTATTTGTGGGTGTGAAAGGTGTAAGATTGAAGCCAACTGGGTTGTTGTTAATGATGCTGATCAAAGAAGTGATTTGCCTCATGGGTGGTTCTTGAAGAAGTATGTGTGTGACAAGAAGAACTGTTCTGGTACGCTGGCTCCTTTGCCTCCAAAGGATGATGATGGTGAGAAATCTAATGTCTTGGAATGTAATTTCTGTGGCAATTTGAAAGTTGAGGTTGCTTGA 1206 0.427 MKPGLPRGKIWVLIIFSSHHISFQILKKNYSSSISMAASSSLLLKLEQIPGKGRGLVAAQNLKAGQIVLTESPIILYSTFSLFSESSSSYSYCDHCFRSILPPSTSYSCPSCSRHNFCSQKCLSLALKSSHSSWVCHALSSLRNSGSDLLRQSHELQVQARFVVAVCNLSLLSPSSIEIMLSLMGTPDDAIVEASSFLHSLISSLCPPPPPQDHHQLSAELTAQLMAKDRLNSFCLMEPYSPDGPQRSIKAYAIYPKATFFNHDCLPNACRFDCVDDGAPGGDEHNTNIVIRMIEDVAEGREVCISYFRINRDYSTRKKILMEDYGFICGCERCKIEANWVVVNDADQRSDLPHGWFLKKYVCDKKNCSGTLAPLPPKDDDGEKSNVLECNFCGNLKVEVA 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0863 401 Gene3D SET domain 55 335 IPR046341 -
Lele49g0863 401 Pfam SET domain 53 307 IPR001214 GO:0005515
Lele49g0863 401 CDD SET_SMYD 231 334 - -
Lele49g0863 401 SUPERFAMILY SET domain 45 329 IPR046341 -
Lele49g0863 401 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 345 399 IPR044238 -
Lele49g0863 401 Gene3D - 151 233 - -
Lele49g0863 401 SMART set_7 42 314 IPR001214 GO:0005515
Lele49g0863 401 Gene3D - 92 145 - -
Lele49g0863 401 ProSiteProfiles SET domain profile. 42 308 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0863 Lele-ChrLele49 5342698 5347091 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele49g0863 SET 6.8e-11 No_clan