Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0836 ATGCGAATCAACGAGGATCTGGCGCAGTCGTTCGGCTCGGATCTGCACAATGTTCCGCTGAGCGAGCTGCGAGCCATAACGCAGAATTTCTCGAGCCATTTTTTGTTGGGAGAAGGAGGGTTTGGGACTGTGCACAAGGGCTACATCGATGATAACTTCCGGCAGGGCTTGAAGGCTCAGCCCGTCGCCGTTAAGCTTCTCGATATTGAAGGCTTGCAAGGACATCGTGAATGGCATGCAGAAGTAGTATTTCTTGGGCAGCTAAGGCACCCAAACTTGGTGAAGTTGATAGGATATTGTTGTGAGGAAGAAGAACGGCTCCTTGTGTACGAGTTCATGCTAAGAGGAAGCCTGGAGAATCACTTGTTCAGAAGGATATCATCACTGCCTTGGGGAAACAGATTGAAAATTGCAATCGATGCTGCTAAAGGCTTTTCCTTCTTGCATGGGGCAGAGAATCCAGTCATTTACAGGGACTTTAAAACTTCCACTGTCTTGCTTCATTCTGATTTCACAGCAAAGTTGTCAGATTTTGGATTAGCAAAAATGGGGCCGGAGGGATCTAAATCTCACGTCACAACTAGAGTCATGGGTACTTATGGATATGCAGCCCCTGAATACATCTCTACGGGTCACTTAACCACAAAAAGCGATGTCTATAGCTTTGGGGTAGTGCTACTAGAACTTCTATCAGGAAGGAGAGCAAAGGAGAAGACAAGACCAAAGACTGAACAGAGCCTTGCGGATTGGTCAAGACCTTCTTTGAGTAGTTCTAGGAAGTTGAGGTATATTATGGATCCAAGGCTTGCAGGGCAGTACTCTGTGAAGGGTTCAAAGGAAATGGCTCATTTGGCACTGCGATGCATAAGTCTGAATCCCAAAGACAGGCCAAGGATGGCAACCATAGTTGAAACTCTTGAAAACTTGCAGCAGTTCAAGGACATGGCTATTTCCTGTGGACACTGGCCTGCTTCAGGAAAATCTAGAAATGCAGCTTCTGATACGATCAAAATTGATATCAGAGTTGGTGCAAACCACAGGAAGCCCTCTCCTGTAGATGCAAGCAAAAAAACTTGA 1077 0.4615 MRINEDLAQSFGSDLHNVPLSELRAITQNFSSHFLLGEGGFGTVHKGYIDDNFRQGLKAQPVAVKLLDIEGLQGHREWHAEVVFLGQLRHPNLVKLIGYCCEEEERLLVYEFMLRGSLENHLFRRISSLPWGNRLKIAIDAAKGFSFLHGAENPVIYRDFKTSTVLLHSDFTAKLSDFGLAKMGPEGSKSHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLSGRRAKEKTRPKTEQSLADWSRPSLSSSRKLRYIMDPRLAGQYSVKGSKEMAHLALRCISLNPKDRPRMATIVETLENLQQFKDMAISCGHWPASGKSRNAASDTIKIDIRVGANHRKPSPVDASKKT 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0836 358 PANTHER OS01G0588500 PROTEIN-RELATED 13 310 - -
Lele49g0836 358 CDD STKc_IRAK 36 309 - -
Lele49g0836 358 ProSitePatterns Protein kinases ATP-binding region signature. 36 65 IPR017441 GO:0005524
Lele49g0836 358 Gene3D Transferase(Phosphotransferase) domain 1 113 320 - -
Lele49g0836 358 Pfam Protein tyrosine and serine/threonine kinase 35 306 IPR001245 GO:0004672|GO:0006468
Lele49g0836 358 SUPERFAMILY Protein kinase-like (PK-like) 13 307 IPR011009 -
Lele49g0836 358 ProSiteProfiles Protein kinase domain profile. 30 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0836 358 FunFam Serine/threonine-protein kinase BIK1 2 112 - -
Lele49g0836 358 Gene3D Phosphorylase Kinase; domain 1 2 112 - -
Lele49g0836 358 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 113 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0836 Lele-ChrLele49 5178713 5181990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0836 22 341 Glycoside Hydrolase AT3G07070 46.933 4.86e-95 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele49g0836 PK_Tyr_Ser-Thr 4.9e-46 CL0016