Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele49g0829 | ATGGGATCCAGTGGTAGTAAAGCCGTTGCGTCTTGCAATTCGTCGTCGACGTCGTCGTCTTCGGGCAGTTTTCGTAAAGTTCGATCTAGAGGGCATAGAGGTTTTCAGTCTTATTGTTTAGGAACAACATCTGGATCTCATGACAATGACAATGACGACCAGGTGTGTGATCAGAGTAAAGAAAACGATCGTAATGTTACATACTCCAATGGTGAAGAAACAGATGCAGATGAGATGATATCGAAGTCTTTCAGAAAGATTAAATCTGATAAAATGCCATGTATACCTACTAATGATCACCTTGATGAGTGGAGTCAAACAAGCATTTCCAATACTGCATCTAGAACTGGTAGCAGTTCTGATCGTCCAGCTTCAACTCAGTCTTTGAACCCTTCAAGTCGATTCCTTTCTCAGTTTAGCCTCATTCCCGGTAACGTAAGCTTCAGACTAAGCAGAACCACAAGTTTGGGGTCAGCACGGCCTTGCCCTGTGTCTCCTGCAGGCCTCTCAATATTTAACAATGAAGATGACCTTAATCCACAGCCTGGGCCTGCCGGCAGCTTTGCTAATAAACATGAAGCTCTACAATGCAGTGACTTGCTTCCTTCATCACATTGCTATGAAGACACTTCTATTAATTTAAGGTCTAGTGTCCCTTCATCAGATTCCTATGGCAACTTGCAAAACAATTCAACAAATTCTTCTATGCAGAATATGATTAGAGATGAAAATGGTGCGAGAGAAGCGTTAAATATCAACTTATTTTCTCCAAGAATTCATGCCAGAACAGAAAACATTGAGATGAGACCTAATGATCGCCGAAATGGAGCTCGAGAACCTGTTGAACGGAATGTTCGCTTTAGTCGTACTTTGAGTGTTGGAAGGCTCCGTGATAGGGTTCTTCGCCGATCAACAATATCAGACTTCACCTTTTGCCCACTGCAACAAGAAAGGGATGCAACAGATGTTAGTCAAGCTATTAGAAGACAAGCAGGGGAGAGAGAGTCAAGAGTGCTACCATCTGACGGTGACTCTACAAGTTCCCCTTCTACATCTGGATATCCTCCATCCAATATGTCTAGCTCCTTGTTTGGCATCCAAGACTATGAGGTCGAGTCTTCACGATCAAGAGAGGCTAGGTACCGTGATCTACTGGAAAACAGATCCAATTTCCTAGAACGGAGAAGAAGAATACGGTCCCAGGTCCGCGCTCTTCAACGATTGGGCAGCCGATTTGAAAACCTGTCTGGGCATGATAGGTCATGTAGTTTATCTGGCCAACATAGAAATGGTCGTTGTACATGCCGAATGAGTAATCATGATGCCAATTCAAATGATGATAGTGGGGCTAGAGCTAGCATATCAAGAATTGTTATGCTTGCCGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCAGTGGTTTTATCTTCCCGCCCTTCTGTTTCTTCCATCGGATCTGTTCCTGCACCTTATGAAGTTGTAGAATCCTTGCCTGTCAAATCATACACAAAGTTGCATAAACATCAAGAGGATGCCGCTCAATGCTATATATGCCTTGTTGAGTATGAGGATGGAGACAGCATGCGAGTACTACCTTGTCATCATGAATTTCATTTAACATGCATAGACAAGTGGCTAAAGGAGATTCACAGGGTATGCCCACTATGCCGTGGGGACATCTGCAATGCTGATTCTATACCAACCGAAAACTGA | 1722 | 0.4338 | MGSSGSKAVASCNSSSTSSSSGSFRKVRSRGHRGFQSYCLGTTSGSHDNDNDDQVCDQSKENDRNVTYSNGEETDADEMISKSFRKIKSDKMPCIPTNDHLDEWSQTSISNTASRTGSSSDRPASTQSLNPSSRFLSQFSLIPGNVSFRLSRTTSLGSARPCPVSPAGLSIFNNEDDLNPQPGPAGSFANKHEALQCSDLLPSSHCYEDTSINLRSSVPSSDSYGNLQNNSTNSSMQNMIRDENGAREALNINLFSPRIHARTENIEMRPNDRRNGAREPVERNVRFSRTLSVGRLRDRVLRRSTISDFTFCPLQQERDATDVSQAIRRQAGERESRVLPSDGDSTSSPSTSGYPPSNMSSSLFGIQDYEVESSRSREARYRDLLENRSNFLERRRRIRSQVRALQRLGSRFENLSGHDRSCSLSGQHRNGRCTCRMSNHDANSNDDSGARASISRIVMLAEALFEVLDEIHQQSVVLSSRPSVSSIGSVPAPYEVVESLPVKSYTKLHKHQEDAAQCYICLVEYEDGDSMRVLPCHHEFHLTCIDKWLKEIHRVCPLCRGDICNADSIPTEN | 573 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele49g0829 | 573 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 1 | 572 | - | - | |
Lele49g0829 | 573 | FunFam | Putative RING zinc finger domain superfamily protein | 487 | 565 | - | - | |
Lele49g0829 | 573 | MobiDBLite | consensus disorder prediction | 50 | 79 | - | - | |
Lele49g0829 | 573 | MobiDBLite | consensus disorder prediction | 109 | 131 | - | - | |
Lele49g0829 | 573 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Lele49g0829 | 573 | SMART | ring_2 | 518 | 559 | IPR001841 | - | |
Lele49g0829 | 573 | MobiDBLite | consensus disorder prediction | 1 | 79 | - | - | |
Lele49g0829 | 573 | MobiDBLite | consensus disorder prediction | 217 | 237 | - | - | |
Lele49g0829 | 573 | CDD | mRING-H2-C3H2C2D_ZSWM2 | 517 | 560 | - | - | |
Lele49g0829 | 573 | ProSiteProfiles | Zinc finger RING-type profile. | 518 | 560 | IPR001841 | - | |
Lele49g0829 | 573 | Pfam | Ring finger domain | 517 | 560 | IPR001841 | - | |
Lele49g0829 | 573 | MobiDBLite | consensus disorder prediction | 330 | 362 | - | - | |
Lele49g0829 | 573 | SUPERFAMILY | RING/U-box | 496 | 565 | - | - | |
Lele49g0829 | 573 | MobiDBLite | consensus disorder prediction | 341 | 362 | - | - | |
Lele49g0829 | 573 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 482 | 565 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele49g0829 | Lele-ChrLele49 | 5134596 | 5138286 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele49g0829 | 236 | 567 | C3H Transcription Factor Family | AT5G45290 | 59.238 | 3.46e-114 | 348 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele49g0829 | 49 | 5134596 | 5138286 | Lele49g0829 | 49 | 5134596 | 5138286 | ECH | |
Lele49g0829 | 49 | 5134596 | 5138286 | Lele51g0850 | 51 | 5206050 | 5209828 | hybridization |