Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0809 ATGCCACAGAACTCCATAGCACCGAAACCAGAATACTGCAGTAGTAGCCCTGTAGAAGAAGGAGCGCAAGAGATGTCAGAGCCCCATAACTCAACTGTCCTTGCCTACCCCGTACAAACCAATGAACAATCTTTACCAAAACTGAATTTGTACCCAATTACTCTAAAGTTCGAGGAACTGGTTTACAAAGTTAAACTAGAACAGAAAGGAGTATGTTGGGGTAGTTCATGGAAATCCAAGGAGAAGACCATATTGAATGGGATTACAGGTATGGTTTTCCCAGGAGAAATACTGGCTATGCTGGGCCCATCTGGCAGTGGGAAGACAACACTTCTCACAGCTCTTGGAGGCCGTCTCAATGGTAAATTATCTGGGAAGATCACATACAACAACCAGCCTTTCTCAGGTTCCATAAAGAGAAGAACTGGGTTTGTGGCTCAGGATGATGTTCTATACCCACATCTCACTGTTCATGAGACTCTATTGTTCACTGCACTTTTGAGGTTGCCTAACAGCTTGACCAGAGACGAAAAAGTCGAGCATGTAGAGCGAGTTATCGTCGAGTTAGGACTGACTCGGTGCAGGGGAAGCGTGATAGGAGGCCCACTTTTCAGAGGAATATCAGGAGGAGAGAAAAAGAGGGTAAGCATAGGTCAGGAAATGCTCATCAATCCAAGCCTTTTGCTGCTTGATGAGCCCACCTCAGGTTTGGACTCTACCACAGCTCAGAGGATCCTAAACACAATCAAACGTCTGGCTAGTGGAGGTAGAACTGTTGTGACCACCATACACCAGCCATCTAGTCGTCTCTACTACATGTTTGATAAGGTAGTCTTGCTATCTGAAGGCTGCCCCATCTATAATGGTCCTGCTTCCACAGCCTTGGAGTACTTCTCATCCATTGGTTTTTCCACATCCATGACTGTCAATCCAGCTGATCTCTTGCTTGATCTGGCCAACGGGATTGCCCCGGACTCCAAGAATGCAACTGAACAAGGTGGGGAGAGCCTGGAGCAAGAAAGGAAGCTAGTCAGGGAAGCACTGATTTCTGCTTATGACAAGAATATAGCAACAAAGTTGAAAACTGAGCTTTGCAGCTTGAATGCGAACAACTACGATATCACAAAAGATACTTCTGCAAAGAGTAACATAAACCCAGAGCAATGGTGCACAAGTTGGTGGTACCAGTTCAAGGTTGCCTTGATCTTTTTCTTCTCTGTTTTCTGGGGATTCTACCCTCTCTACAACGCAGTTTTCACATTTCCTCAAGAAAGAAGAATGCTGATCAAGGAACGGTCGTCAGGAATGTACCGCCTTTCATCCTACTTTCTAGCTAGAACAATAGGAGACTTGCCACTGGAACTGGCTCTTCCAACTGCATTTGTCTTCATCCTCTACTGGATGGGAGGGCTTAACCCTCACCCTGTGACGTTCATCCTTTCCCTTCTTGTGGTTCTTTACAGTGTTCTTGTCTCTCAAAGTCTTGGCTTAGCATTTGGTGCTATTCTTATGGAGGTCAAGCAGGCCACAACCTTAGCTTCTGTCACAACCCTCGTATTTCTCATTGCCGGAGGATACTATGTACAACAAATCCCTCCCTTCATAGTGTGGTTCAAGTACTTGAGCTACAGCTACTATTGTTACAAACTTCTTCTCGGAGTCCAGTACAATGACAATGATGTTTATGAGTGCTCAAAGGGTGTCTTGTGCAGGGTTGGAGATTTTCCTCCGATCAAATCAATGGGTTTGAACCATCTGTGGGTTGATGTGGCCATTATGGCTTTGATGTTGGTAGGTTATCGGCTCGTTGCTTATGTGGCACTACATAGAGTGAGGTAA 1839 0.4541 MPQNSIAPKPEYCSSSPVEEGAQEMSEPHNSTVLAYPVQTNEQSLPKLNLYPITLKFEELVYKVKLEQKGVCWGSSWKSKEKTILNGITGMVFPGEILAMLGPSGSGKTTLLTALGGRLNGKLSGKITYNNQPFSGSIKRRTGFVAQDDVLYPHLTVHETLLFTALLRLPNSLTRDEKVEHVERVIVELGLTRCRGSVIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILNTIKRLASGGRTVVTTIHQPSSRLYYMFDKVVLLSEGCPIYNGPASTALEYFSSIGFSTSMTVNPADLLLDLANGIAPDSKNATEQGGESLEQERKLVREALISAYDKNIATKLKTELCSLNANNYDITKDTSAKSNINPEQWCTSWWYQFKVALIFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFILYWMGGLNPHPVTFILSLLVVLYSVLVSQSLGLAFGAILMEVKQATTLASVTTLVFLIAGGYYVQQIPPFIVWFKYLSYSYYCYKLLLGVQYNDNDVYECSKGVLCRVGDFPPIKSMGLNHLWVDVAIMALMLVGYRLVAYVALHRVR 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0809 612 MobiDBLite consensus disorder prediction 1 29 - -
Lele49g0809 612 Gene3D - 71 301 IPR027417 -
Lele49g0809 612 Pfam ABC-2 type transporter 398 556 IPR013525 GO:0016020|GO:0140359
Lele49g0809 612 Pfam ABC-2 type transporter 264 330 IPR043926 GO:0140359
Lele49g0809 612 ProSitePatterns ABC transporters family signature. 207 221 IPR017871 GO:0005524|GO:0016887
Lele49g0809 612 FunFam ABC transporter G family member 22 72 301 - -
Lele49g0809 612 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 30 400 - -
Lele49g0809 612 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 55 307 IPR003439 GO:0005524
Lele49g0809 612 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 301 IPR027417 -
Lele49g0809 612 SMART AAA_5 94 284 IPR003593 -
Lele49g0809 612 CDD ABCG_EPDR 52 289 - -
Lele49g0809 612 Pfam ABC transporter 85 235 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0809 Lele-ChrLele49 4935225 4937932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0809 84 283 Calmodulin-binding Proteins AT2G36910 29.327 6.23e-13 70.5