Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0784 ATGAAGATGGAGAGTGCCAGAAATAACATGTTCTTCATCGTATCTTTGCTCACGTTGTTGCCCCAAACAAAGGTGTTATGCTTCACGTACAAGGTTGGAGATTTAGATTCCTGGGGAATCCCCACCTCTTCAAACCCAGACCTCTACCCCAAATGGTCCAAACATACCAATCTCAAGATCGGAGATTCCATCTTGTTCTTGTATCCTCCGAGTCAAGATTCAGTGATCCAAGTGACGTCTGAGTCTTACAAGAGTTGCAACCTTAAAGATCCCATATTGTACATGAACGACGGCAACTCTCTCTTCAACATTACTTCTAACGGAGTATTCTACTTCACCAGTGCAGAAGCAGGCCATTGCCAGAAGAAGCAGAATCTTCGTCTAGTTGTCGGCGACGGAAATGGCGCTTTGCCCTCTGATGATGCTCCCACCGCTGCCTTGCCTGAAATCGCCGCCGATGCGCCGTCCTATCCCACTGTGTTTGGAAGCATTCCGGTTACTGCTTCTTCTACTGCTCCTCCCTTCTCTTCTTCTTCTGCTCTTTCTCTTCTCATCTTCACCCTTTTTGGATTGGCCATCCCTCCGTCTCATTAG 594 0.4747 MKMESARNNMFFIVSLLTLLPQTKVLCFTYKVGDLDSWGIPTSSNPDLYPKWSKHTNLKIGDSILFLYPPSQDSVIQVTSESYKSCNLKDPILYMNDGNSLFNITSNGVFYFTSAEAGHCQKKQNLRLVVGDGNGALPSDDAPTAALPEIAADAPSYPTVFGSIPVTASSTAPPFSSSSALSLLIFTLFGLAIPPSH 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0784 197 Gene3D - 27 135 IPR008972 -
Lele49g0784 197 SUPERFAMILY Cupredoxins 27 130 IPR008972 -
Lele49g0784 197 Pfam Plastocyanin-like domain 47 123 IPR003245 GO:0009055
Lele49g0784 197 ProSiteProfiles Phytocyanin domain profile. 28 132 IPR003245 GO:0009055
Lele49g0784 197 PANTHER BLUE COPPER PROTEIN 27 148 IPR039391 GO:0009055
Lele49g0784 197 FunFam Early nodulin-like protein 1 27 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0784 Lele-ChrLele49 4756774 4757455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0784 3 166 Phytocyanin Superfamily AT1G64640 53.892 1.54e-53 167