Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0782 ATGGGTGAACCTTGGATTGGTATAAGGATGTCTACCTTCTTGCGGAATCGAAGTTCTTTTATGGATTTTGGATCTTCAGCTATGGATTCCGGCGTTGGTTTTTCTGTTGGCAAGTTTGAGAACGATGATGCTGATGTTGTGGAGAAAGATCCTACTGGTCGTTACATTCGGGTATGTGGATTTGATCTTTCTAGATTGCTACGTTACTATTTCCCTGATACTGAGAATTTAGTGGTAAACCCTAAAATTTTCATTCTGTATGATGATATGTTGGGGAGAGGAGCATTCAAGACTGTATATAAGGCATTTGATGAAGTTGATGGGATAGAAGTTGCCTGGAACCAAGTGAATATTGAGGACGTTTTGCAGTCTCCACAACAATTGGAAAGGTTATATTCTGAGGTACATCTCCTGAAGTCATTGAAACATGAAAACATGATCAAGTTGTATAATTCTTGGGTGGACGATACAAACAAGACGATTAACATGATAACTGAGTTATTCATGTCTGGGAGTTTGAGACGATATCGAAGAGTGCATAAGAATGTTGAATTGAAGGCCATCAAGAACTGGGCAAGGCAAATTCTTCAAGGTCTATGCTATCTGCATACACACAATCCTCCAATTATCCATAGAGATTTGAAATGCGATAATATTTTTATTAATGGTAATACTGGAGAAGTTAAGATTGGAGATCTTGGACTGGCAACTGTCCTACAGCAACCCACTGCACGGAGTGTCATTGGGACACCAGAATTCATGGCTCCTGAGCTTTATGAAGAAGAGTATAATGAACTTGTTGACATATATTCTTTTGGCATGTGCATGTTAGAAATGATCACCTGTGAGTACCCATATAGCGAATGCAAAAATCATGCACAGATATATAAGAAAGTTACCTCTGGAATAAGGCCTGCTGCTCTTGGTAAAGTGAATGATCCACAAGTGAAGCAATTCATAGAGAAATGTTTGGTTCCAGCGTCTGAGAGATTGCCTGCATCTGAGCTATTGAAGGATCCATTTCTTGCTACTGACAACATAAAGGAGATCAACCATGCACTGCAGTTGCCGAATCGCATGACTGAATTGGTGACACCACCAACAATTGGGCCACGTCCCATGGAGATAGACCAAACCGTAGTGGATGTTTTACCTGGTTCCCATTTGGAATTTACTGAACAAACTCCTCGAATATTAACTCTAGATTTCCTTAGGAAGGATAAGGGTAATAAATTCAGGTTACGAGGGGAGAAAAATGCTTCAGACAGAACAATTTCACTTAACCTGCGCATTGTTGAAGCAAATGGTCTTGCGAGGAATATCCACTTTCCATTCTATCTTGATTCTGATACAGCCATTTCAATTGCTGAGGAGATGGTTGAAAATCTGGATCTCGCCGCTGAGGACGTGAGCATTATTGCTGAACTAATACACACCATGACTGTCAGGCTGTCGCGTCAACAATCATCATCTGGAGAAGAATGTTTGGGTGGCCATTCTCATGTAGTTCTAAATGGGGGATCATCTTTAAGGTCCAATTCAGATGTCAGGTTATATGATCAAGATGAACGCAATAGGGAAGTTAATGGCTGTGGATGTGTTAACATCAATGGATCTGATAGGAACTCAGGGAACATCGTTTCAGAGAACTCAACTGTCTCATTTATAGATTCATGTGGCGATGAGCCCAAGAATTTTTACATGTCAAGCATCAATTCTCTTTCTCTCGCAGACAAGGATCAATGTGACGAGCTGCAACTGGAGCTTGATGCAATAAATACGCAGTTCCTCCAATGCTTTCTTGAACTTGCCAAGACGAGGGAGGATGCAATAGAAAACGCAAAAAGGAGAAGGATTACAAGGAAGAAAATACCAGTAGTGTGA 1884 0.4066 MGEPWIGIRMSTFLRNRSSFMDFGSSAMDSGVGFSVGKFENDDADVVEKDPTGRYIRVCGFDLSRLLRYYFPDTENLVVNPKIFILYDDMLGRGAFKTVYKAFDEVDGIEVAWNQVNIEDVLQSPQQLERLYSEVHLLKSLKHENMIKLYNSWVDDTNKTINMITELFMSGSLRRYRRVHKNVELKAIKNWARQILQGLCYLHTHNPPIIHRDLKCDNIFINGNTGEVKIGDLGLATVLQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCMLEMITCEYPYSECKNHAQIYKKVTSGIRPAALGKVNDPQVKQFIEKCLVPASERLPASELLKDPFLATDNIKEINHALQLPNRMTELVTPPTIGPRPMEIDQTVVDVLPGSHLEFTEQTPRILTLDFLRKDKGNKFRLRGEKNASDRTISLNLRIVEANGLARNIHFPFYLDSDTAISIAEEMVENLDLAAEDVSIIAELIHTMTVRLSRQQSSSGEECLGGHSHVVLNGGSSLRSNSDVRLYDQDERNREVNGCGCVNINGSDRNSGNIVSENSTVSFIDSCGDEPKNFYMSSINSLSLADKDQCDELQLELDAINTQFLQCFLELAKTREDAIENAKRRRITRKKIPVV 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0782 627 Pfam Protein kinase domain 89 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0782 627 CDD STKc_WNK 84 342 - -
Lele49g0782 627 Gene3D Phosphorylase Kinase; domain 1 77 166 - -
Lele49g0782 627 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 40 514 - -
Lele49g0782 627 FunFam probable serine/threonine-protein kinase WNK9 168 347 - -
Lele49g0782 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Lele49g0782 627 SMART serkin_6 85 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0782 627 Gene3D Transferase(Phosphotransferase) domain 1 168 350 - -
Lele49g0782 627 SUPERFAMILY Protein kinase-like (PK-like) 89 384 IPR011009 -
Lele49g0782 627 FunFam Probable serine/threonine-protein kinase WNK1 74 166 - -
Lele49g0782 627 ProSiteProfiles Protein kinase domain profile. 85 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0782 627 Gene3D - 423 501 - -
Lele49g0782 627 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 438 479 IPR024678 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0782 Lele-ChrLele49 4750410 4753319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0782 28 626 MAP Kinase Kinase Kinase AT5G41990 53.583 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele49g0782 Pkinase 1.1e-51 CL0016