Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0780 ATGGTTGAGACTCAGATGGGTTCTTCGTCGCTTTGGAATAATCTCAAATGTCTTTGTTCTGCTCATGGTTGGTCTTACGCCGTTTTCTGGCGCTCTCATTCTCCTAATTCCTTGTTCCTGTCTGTGGAAGATGCTTACTACGAAGAAGAAGGGCAAATGGGACAAGAACTTACTAAGACGATTCCACAGCTTCATTTCCTGGGTGAAGGAATTGTTGGTCAAGTTGCTTTTACTGGCAAGCCCAGATGGATTTTCTCAGATTCTCAAACCCAGGAATGGAATCTTACAAGTGTCTTAGGAGGTCTAGATCATTCTGAGCAGCTTGATTCTGACTTTCGTCAACAATTCTCCTCTGGGATCAAGACAATTGCTGTGATATCTGTTAAACCATTGGGAGTAGTACAATTTGGATCCACAAAGAAGATCTTGGAAAGAGAAGAAATTCTGGAACAGACACAAAGGTTGTTCATGGAGACTGACAGTTTGGATACAATAGACGCACCTGCAAATACGGTTTTACCTTTGGATTTTGAAAGTTGTGATCTGAATGGATTGTTGGCCTCTGATGAAAACTGGTGTTCTTGGAATCTCAACCCTGATGAAGATGACAATAACATGAATGAGGGAATGAGAAATGCTTGTTTTTCAACAATAAGCATGGATAATAATTCTCTCCTTTCTACCTGTAAGAATCAGGAAGATGGAATCATCACCAGCTTCAGCTTGCATGGGGAATCTTCTTGTCTTAGCGATCAATTGACAAACAGTTTTGAAGTTCTTTTGAATCCTAACTCTTATGTGAAAAACCCATCGTGTTTTGGCACACAGAGCAGTGAAGTTTCTTTAGCTTCATCAATGGCTCAAGATTTTACTGCTGAGGATTCGTTATTAACCTCTTTGTACAGCATGAACACAGGCATGCTTGGATCAGGAGGATCATTTCAAGACAAATTAGGGATTAATTCTCTGGAACACAACCACCCTTTTGCTCAATCCCTACATGGACTGTCTAAGATGTCGACCAAGGACTTGTCCGAGTTGTGCTCTGTGGATGATCTTTGTCAGAGGTTTGCTTCTTCTCCAGAACATAGCACCGGTGCAACAAACACCGCATTTGAAAATTCTCTTTCTCAATCCCTAGAACTCAATCCCACTTTTGTTGCCCCAAGTGATGATCCACTCAAAAATCTCTCAGATGAATACCAAACATCAACCCTAATGCATGCTTTTGGTGGTGAGTGCTGGGGGAATATGATTGCACCAATGGTACTGAAATCTGCTACCAATACTGCTTCATCTGAATGCAAATCTGTTACACCTAATGGCACCAAGAAGGGATTATTTGCAGAGCTTGGCATTGAAGAGCTTTTGAATGGTAGATCCAGTAGTTTTGAGGATCAAATTTCTACTGCTAAAAGGCGTATGACAGATTCTTCATCTGGGAGTACTAATACTGTTTCTAACTTGGACAAGGCAAACAATCTTGTACACAAGAAAGACATATTCCCTAGTTCAGTGGTAGGGTCATGGATGGACCATAGTCATTACTTCAATGGTGTTAAGGTTGTCCCTCAAAAGCCAGAGGAATCCACAAAGGTCTCGAGGAAGAGGGCTAGGCCAGGAGAGAGTACTCGACCCAGACCGAAAGATCGCCAGCAGATCCAAGACCGTATTAAAGAGCTGAGAGGAATCATCCCGAGTGGTGGAAAGTGTAGCATCGACTCTTTGTTGGATCGCACAATCAAATACATGGTTTTCTTACAAAGCGTCGCAAAATATGCGGACAAGCTGCAAGAACCCAAAAGTCCTAAGCTCAATGAGGAGGCAAATAGTATGGTTGCAAAGAACAAAAGTGTGGGAGAATCCGATATGAAGGGCGGCGGCGGCGGCGTTACATGGGCATTTGAAGTTGCCGGTCAAAAAATGGCATGCCCAATTATAGTGGAGGACATGAACCAACCCGGCCAAATGCTCATAGAGATGCTTTGTGAGGATCAGGGCTTGTTCCTCGAGATAGCCGAAATAATCCGTGGATTTGGACTGAATATTCTGAAAGGGAAGATGGAAATTAGGGAGAACAAGTTATGGGGAAGATTCATTGTTGAGGCAAGCAGACATATAACGAGGATTGATGTATTCTGGTACTTGGTTCAGCTTGTACCGCAGACAAGTGCATCTTCTGGAATGGATAGTTATCAGAAAACAGAAATGGCACTTCCTGCTGTGGCCATGACGTGA 2238 0.4281 MVETQMGSSSLWNNLKCLCSAHGWSYAVFWRSHSPNSLFLSVEDAYYEEEGQMGQELTKTIPQLHFLGEGIVGQVAFTGKPRWIFSDSQTQEWNLTSVLGGLDHSEQLDSDFRQQFSSGIKTIAVISVKPLGVVQFGSTKKILEREEILEQTQRLFMETDSLDTIDAPANTVLPLDFESCDLNGLLASDENWCSWNLNPDEDDNNMNEGMRNACFSTISMDNNSLLSTCKNQEDGIITSFSLHGESSCLSDQLTNSFEVLLNPNSYVKNPSCFGTQSSEVSLASSMAQDFTAEDSLLTSLYSMNTGMLGSGGSFQDKLGINSLEHNHPFAQSLHGLSKMSTKDLSELCSVDDLCQRFASSPEHSTGATNTAFENSLSQSLELNPTFVAPSDDPLKNLSDEYQTSTLMHAFGGECWGNMIAPMVLKSATNTASSECKSVTPNGTKKGLFAELGIEELLNGRSSSFEDQISTAKRRMTDSSSGSTNTVSNLDKANNLVHKKDIFPSSVVGSWMDHSHYFNGVKVVPQKPEESTKVSRKRARPGESTRPRPKDRQQIQDRIKELRGIIPSGGKCSIDSLLDRTIKYMVFLQSVAKYADKLQEPKSPKLNEEANSMVAKNKSVGESDMKGGGGGVTWAFEVAGQKMACPIIVEDMNQPGQMLIEMLCEDQGLFLEIAEIIRGFGLNILKGKMEIRENKLWGRFIVEASRHITRIDVFWYLVQLVPQTSASSGMDSYQKTEMALPAVAMT 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0780 745 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 11 735 IPR043561 GO:0003700|GO:0006355
Lele49g0780 745 MobiDBLite consensus disorder prediction 522 554 - -
Lele49g0780 745 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 551 593 IPR036638 GO:0046983
Lele49g0780 745 MobiDBLite consensus disorder prediction 528 554 - -
Lele49g0780 745 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 538 587 IPR011598 GO:0046983
Lele49g0780 745 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 61 156 IPR025610 -
Lele49g0780 745 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 13 53 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0780 Lele-ChrLele49 4738052 4741318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0780 497 743 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 47.308 2.08e-66 230