Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0776 ATGCCTACTTCTCGCATTTCAGAATCTTCACCTTCTTGTTTTTTGGACCCAGACGTGGTTAAGCCCTCAACCCAACTTGTCTCCTTCCTTGAACGTCTACAGGAAACCGCTCTAACCACTTTGGGCAAATCTAAATTCGATCCAAAAACATATGTGGACTTGACCTTGAAGTTCAACTTGTCTGAAACAGAGGAGGCATTTGATAAGCTTGCTAGGTCTGCTAATGGCTCTGTGCCAGCCGATGAGTTGAATGGCTTTATAGAAAGATACTTTGATGGTGCAGGGGACGACGTGGTGTACTACGAGCCAGATGATTACGTAGAAGAGCCAGACGGATTCTTGCCCAAAGTTGAGCATCCAGAGGTGAGGGCATGGGCATTGAAGATCCATTCCCTTTGGAAAAACTTGAGTCGCAGAGTATCAACTGGGGTCAAAAGCCATCCCCATTTGCATACCCTTCTTCCGCTGCCTTCTTCTTTCGTTATTCCCGGTTCTCGCTTTCGTGAGGTTTATTACTGGGATTCCTACTGGGTGATCAGGGGCTTACTGGTGAGTAAAATGTACAAGACAGCCACGGCAGTCGTGACTAATCTTATTTCTTTGATAGAGAAATATGGATTTGTGCTTAATGGTGCAAGAGCCTACTACACCAACAGAAGCCAACCTCCCCTTTTAAGTTCTATGATTTATGAGATTTACAATAACACCGGTGATATAGAATTGGTCAAAAGATCGCTTCCTGCGCTGCAGAAAGAATATGAATTTTGGAATTCAGACATACATAGGGTGACCATTGTGGATACTCAAGGTTATGCTCACACCTTAAATCGTTATTATGCAATGTGGAATAAACCTAGGCCAGAGTCTTCAATAATCGACAAGGCGTTTGCTTCCAAGCTTTTGAATGTTTCAGAAAAACAGCAATTTTACCGTGAAGTGGCCTCAGCTGCTGAATCAGGATGGGATTTTAGTACAAGATGGATGAGAGATCCGTCAGATTTTACCACATTGGCTACAACAGCAGTAATACCTGTTGATCTAAATGCTTATATACTTGGGATGGAACTTAATATAGCATTTTTCGCTGAAGTTACCGGAGATAATAATACCGCTCAGCACTTCCTGCAACTTGCTGGTAATAGAAAGAAGGCGTTCAACTCAGTTTTTTGGAACATAAACAAGAAACAATGGCTTGATTACTGGCTCACAAGTAGTACATGTCAGGAAGCTCAAGTCTTGGATGCTCACCAGCAGAATCAAAATGTATTTGCTTCCAATTTTGTTCCTCTGTGGATGGAACCATTTTACTCAGACTCTTCGGTTGCGGGTGGCGTTGTTGAAAGCCTCAAAACTAGTGGGTTGCTTGGTGCTGCTGGAATTGCAACCTCTCTGACGAATTCTGGACAACAGTGGGACTTCCCAAATGGCTGGGCCCCACTTCAACACATGATAGTAGAAGGTCTGGTGAAATCTGGGTTGAAAGAAGCAGCTTCATTAGCAGAAGAAATTGCAAGGAGATGGGTCACAACCAACTATGTTGCCTATAAGAAAAAGGGGGTGATGCATGAAAAATATGATGTGGAGCATTGTGGAGAGTATGGAGGTGGTGGGGAATATGTACCTCAGACTGGTTTTGGGTGGTCGAACGGGGTGGTGCTTGCTCTCTTGGAGGAGTTTGGATGGCCTAAAGATCTCAATATTGGCTGTTCATAG 1713 0.4372 MPTSRISESSPSCFLDPDVVKPSTQLVSFLERLQETALTTLGKSKFDPKTYVDLTLKFNLSETEEAFDKLARSANGSVPADELNGFIERYFDGAGDDVVYYEPDDYVEEPDGFLPKVEHPEVRAWALKIHSLWKNLSRRVSTGVKSHPHLHTLLPLPSSFVIPGSRFREVYYWDSYWVIRGLLVSKMYKTATAVVTNLISLIEKYGFVLNGARAYYTNRSQPPLLSSMIYEIYNNTGDIELVKRSLPALQKEYEFWNSDIHRVTIVDTQGYAHTLNRYYAMWNKPRPESSIIDKAFASKLLNVSEKQQFYREVASAAESGWDFSTRWMRDPSDFTTLATTAVIPVDLNAYILGMELNIAFFAEVTGDNNTAQHFLQLAGNRKKAFNSVFWNINKKQWLDYWLTSSTCQEAQVLDAHQQNQNVFASNFVPLWMEPFYSDSSVAGGVVESLKTSGLLGAAGIATSLTNSGQQWDFPNGWAPLQHMIVEGLVKSGLKEAASLAEEIARRWVTTNYVAYKKKGVMHEKYDVEHCGEYGGGGEYVPQTGFGWSNGVVLALLEEFGWPKDLNIGCS 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0776 570 Pfam Trehalase 46 560 IPR001661 GO:0004555|GO:0005991
Lele49g0776 570 PRINTS Glycosyl hydrolase family 37 signature 385 401 IPR001661 GO:0004555|GO:0005991
Lele49g0776 570 PRINTS Glycosyl hydrolase family 37 signature 342 359 IPR001661 GO:0004555|GO:0005991
Lele49g0776 570 PRINTS Glycosyl hydrolase family 37 signature 310 327 IPR001661 GO:0004555|GO:0005991
Lele49g0776 570 PRINTS Glycosyl hydrolase family 37 signature 463 479 IPR001661 GO:0004555|GO:0005991
Lele49g0776 570 PRINTS Glycosyl hydrolase family 37 signature 543 556 IPR001661 GO:0004555|GO:0005991
Lele49g0776 570 PRINTS Glycosyl hydrolase family 37 signature 205 223 IPR001661 GO:0004555|GO:0005991
Lele49g0776 570 PRINTS Glycosyl hydrolase family 37 signature 275 292 IPR001661 GO:0004555|GO:0005991
Lele49g0776 570 PANTHER TREHALASE 30 566 IPR001661 GO:0004555|GO:0005991
Lele49g0776 570 Gene3D - 33 566 IPR012341 GO:0005975
Lele49g0776 570 ProSitePatterns Trehalase signature 2. 470 479 IPR018232 GO:0004555|GO:0005991
Lele49g0776 570 SUPERFAMILY Six-hairpin glycosidases 42 562 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0776 Lele-ChrLele49 4709494 4713342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0776 16 567 Trehalose Biosynthesis Gene Families AT4G24040 59.532 0.0 675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0776 49 4709494 4713342 Lele49g0776 49 4709494 4713342 ECH
Lele49g0776 49 4709494 4713342 Lele51g0801 51 4833509 4837338 hybridization
Lele49g0776 49 4709494 4713342 Lele52g0803 52 5090540 5094870 hybridization