Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0764 ATGCAATCCGATATTACCCAACTTGGAGTTATGGCTGAAAACAATAGGAAGGACAATTCTGGCATGTGGCATCACAGTCAAGCTGAAATGAATAGTAAAGGCAGCAGCAACACTCTTTCACGAAATCAAACAGAAGGGAGTTGGCTATCTTCTCCCCACTCAAGCAGTCCTCCACAACTGTTGCAGGACACCACAGATGACGGCAAGAGTGTCTCTGCTTGGCCTGTTCACTCAGTTCATTCAACACCTCACTCATCGCGACTGAACAATGATCATATGCTTGAACAATCTGGCAAGGAGAATAAAGTTGAGATTGCTACAAGCTGTCGATTGTTTGGGATTGAGCTTATCGATCATTCTCAAAATTCAACTTCTATGGAGAAGGCACCTGCACATGCAGCTGGTATGCTTAATGGCCCTTCTGAAAGTCATGTCAATGCCTTGTCCGGAACTGATTCAGATCGTAAGTATAACATCTCAAAGGCTTCCCATGAGGGGAAACAAGAACATCTGCAAGTAAAGGAGACTCAGAGCAAGCAAATATGTTCCAGAAGTCGCACCAAGGGGGTCGCAGTGGGTCGTGCTGTGGACTTGGCCATGTTGGATGGTTATGATCAACTTATCGATGAGTTGGAGGAGATGTTTGACATAAAAGGACAACTTAAACATAGGAAGACATGGGAAATTGTCTTCACTGATGATGAAGGGGACATGATGCTCGTGGGCGATGATCCATGGCCTGAATTCTGTAATATGGTGAGAAGAATCTTCATTTGTTCTAGCCAGGATATGAAGAAGATGAATACGGGAAGCAAATTTGCCTATTTCATCAATGGAGGGGGATGGGACTGTAATAAGTGGGAGCACAGATGA 873 0.4444 MQSDITQLGVMAENNRKDNSGMWHHSQAEMNSKGSSNTLSRNQTEGSWLSSPHSSSPPQLLQDTTDDGKSVSAWPVHSVHSTPHSSRLNNDHMLEQSGKENKVEIATSCRLFGIELIDHSQNSTSMEKAPAHAAGMLNGPSESHVNALSGTDSDRKYNISKASHEGKQEHLQVKETQSKQICSRSRTKGVAVGRAVDLAMLDGYDQLIDELEEMFDIKGQLKHRKTWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDMKKMNTGSKFAYFINGGGWDCNKWEHR 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0764 290 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 43 268 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele49g0764 290 ProSiteProfiles PB1 domain profile. 180 261 IPR000270 GO:0005515
Lele49g0764 290 MobiDBLite consensus disorder prediction 24 91 - -
Lele49g0764 290 Pfam AUX/IAA family 151 264 IPR033389 -
Lele49g0764 290 SUPERFAMILY CAD & PB1 domains 181 256 - -
Lele49g0764 290 MobiDBLite consensus disorder prediction 1 91 - -
Lele49g0764 290 Gene3D - 176 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0764 Lele-ChrLele49 4630712 4631815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0764 55 277 B3 DNA Binding Superfamily AT4G23980 47.845 6.79e-52 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele49g0764 AUX_IAA 1.9e-09 CL0072