Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0758 ATGGACGTTGAACTCAAAGGACGAATCGAGACCACTGTTCGGAAGATTCTGGAAGAATCAAACATGGATGAGATCACGGAGTCCAAAATTAGGAAGCTTGCCGCCAAAGAACTCGACCTCGACCTTTCGCACTCGCATTACAAAGCCTTTGTGAAGCAGGTTGTGGAGTCCTTCATTCAGGAAAAGCAGGAGGAGCAGGAGGAGGAAGAAAATTCACAAGAGGAAACTGCTCAAGACCAGGAGTACGATGATGAAGGCAATCTCATTATCTGCAAGCTTTCAGCTCAGAGAAGGGTGACGATTCAAGAATTCAGAGGGAAAACATTGATCTCTATTCGGGAGTACTATAGAAAGGACGGTAAAGAACTTCCTTCTTCGAAAGGAATAAGCTTGACGGAGGAGCAGTGGTCGACCTTGAAGAAGAATATACCTGCCGTAGAAAAAGCCGTTCAGAAACTGGAGTCGAACATGACTTTATGA 480 0.4521 MDVELKGRIETTVRKILEESNMDEITESKIRKLAAKELDLDLSHSHYKAFVKQVVESFIQEKQEEQEEEENSQEETAQDQEYDDEGNLIICKLSAQRRVTIQEFRGKTLISIREYYRKDGKELPSSKGISLTEEQWSTLKKNIPAVEKAVQKLESNMTL 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0758 159 PIRSF RNA_polymII_KELP 1 157 IPR017415 -
Lele49g0758 159 MobiDBLite consensus disorder prediction 62 82 - -
Lele49g0758 159 MobiDBLite consensus disorder prediction 61 83 - -
Lele49g0758 159 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 6 155 IPR045125 GO:0003713|GO:0060261
Lele49g0758 159 SUPERFAMILY ssDNA-binding transcriptional regulator domain 90 153 IPR009044 GO:0003677|GO:0006355
Lele49g0758 159 Pfam Transcriptional Coactivator p15 (PC4) 91 142 IPR003173 GO:0003677|GO:0006355
Lele49g0758 159 SUPERFAMILY DEK C-terminal domain 8 60 - -
Lele49g0758 159 FunFam RNA polymerase II transcriptional coactivator KELP 80 156 - -
Lele49g0758 159 Gene3D - 6 62 - -
Lele49g0758 159 Coils Coil 55 80 - -
Lele49g0758 159 Pfam DEK C terminal domain 8 59 IPR014876 -
Lele49g0758 159 Gene3D Transcriptional Coactivator Pc4; Chain A 80 158 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0758 Lele-ChrLele49 4597900 4599809 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Lele49g0758 DEK_C 2.7e-13 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0758 49 4597900 4599809 Lele49g0758 49 4597900 4599809 ECH
Lele49g0758 49 4597900 4599809 Lele51g0782 51 4721306 4722967 hybridization
Lele49g0758 49 4597900 4599809 Lele52g0787 52 4970108 4971909 hybridization