Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0732 ATGTTTAGGCCCGAAGAGGGGCTTTTTAGTCATATTGAAGATGGTTTGCGAGGGGCAGTTGTGAACGGGGATTCATTCTTGCCTTCAAGCCCCACACAACTTCCTAATCTACTTCCTTCTCCTCCTTCCTCTGTTTTCTCATGCCCTCTCTGTTTCCTTCCCAATCCCTCTTTGATCTCCGGGATCACTTCATTCTCAAGTTTTAATAACCTTCGGGAAAACACCCAATTCCTGTTTTCCTCCCCTCTCTCACATTTGAAGCAGCCTTATTACCCTGTTTTTCTTTCTTCTTTGGAAGAGGGAAGGGACCAGCTTTTCAGTGTTCTTCTTCCCCACCATTTTTTCCCTTTCCGTAGAATCTCACTAGAAAGTTTTGCCAGAATCATGGAGGGATTTCACGAGAGAGATGCTCAGCTTGAACCGCATAACATTGCTGATATAGGGTCATCTCTGTCAAATCTGATATTATCCGGTGGGACGAACCCCTTGGATTCTATTTTATCTCTTTGCCCTCAAACAACCGCCACAAGCAACCCCATGTTTAAAGCCTTAGCGGGCTCGTGCGGTTTTGAACCGCTGGGCTCGTCGGTGTACCTTCGTCAACGAGACCTTCTGCAGAAATTCTACGAGGATAACCGAGTGAGTAGTTCATTTGGCGGTTTATCATCGACAAATCAAGGTCTAAACTTTGCAGGAGCAACATCATCGTACTCATACATGAACAACCCCTGCAAGAAGAAGCTATACAGGGGAGTGAGACAGAGACAATGGGGAAAATGGGTTGCAGAAATCAGACTTCCTCAGAACAGAATGAGAGTGTGGTTAGGCACTTATGAAACTGCCGAAGCTGCCGCTTATGCCTACGATCGTGCCGCTTATAAGCTCCGAGGTGAATATGCTCGTTTGAATTTCCCGAACCTAAAGGACCCCAGTAAGTTAGGATTCGGAGATAGCTCCAGATTAAATGCTTTGAAAACCTCTGTAGATGCTAAAATTCAGGCTATCTGTCAAAAGGTGAAGAGGGAGAAAGCCAAGAAGAAGAGCAGCGCTAAGAAGCCTAATAATCCCATTCCCAGCCCCGAACAGAGTGAGAAATCACAGAAGATTGAGTCGTCTTCTTGTTCATCATCCTCGATACCCTTATCCCCGTTAGTATTTGACGATAACTGGTCAAACGAGTTCATTTCACCGACGATTTCAGAAGACGGAATATGGAAGGGCGACAATTCGCCGTCAACGGTCTCAACCGATTTTCCGACAATGTTAACAGAGGAATCAGAATTCGGAGGTTGTTCCCTGGCAAGGATGCCTTCCTTCGATCCGGAGTTAATTTGGGAAGTTCTTGCTAATTAA 1353 0.456 MFRPEEGLFSHIEDGLRGAVVNGDSFLPSSPTQLPNLLPSPPSSVFSCPLCFLPNPSLISGITSFSSFNNLRENTQFLFSSPLSHLKQPYYPVFLSSLEEGRDQLFSVLLPHHFFPFRRISLESFARIMEGFHERDAQLEPHNIADIGSSLSNLILSGGTNPLDSILSLCPQTTATSNPMFKALAGSCGFEPLGSSVYLRQRDLLQKFYEDNRVSSSFGGLSSTNQGLNFAGATSSYSYMNNPCKKKLYRGVRQRQWGKWVAEIRLPQNRMRVWLGTYETAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSKLGFGDSSRLNALKTSVDAKIQAICQKVKREKAKKKSSAKKPNNPIPSPEQSEKSQKIESSSCSSSSIPLSPLVFDDNWSNEFISPTISEDGIWKGDNSPSTVSTDFPTMLTEESEFGGCSLARMPSFDPELIWEVLAN 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0732 450 PRINTS Ethylene responsive element binding protein signature 271 287 IPR001471 GO:0003700|GO:0006355
Lele49g0732 450 PRINTS Ethylene responsive element binding protein signature 249 260 IPR001471 GO:0003700|GO:0006355
Lele49g0732 450 ProSiteProfiles AP2/ERF domain profile. 248 305 IPR001471 GO:0003700|GO:0006355
Lele49g0732 450 SUPERFAMILY DNA-binding domain 248 305 IPR016177 GO:0003677
Lele49g0732 450 FunFam Ethylene-responsive transcription factor 2 247 306 - -
Lele49g0732 450 SMART rav1_2 248 311 IPR001471 GO:0003700|GO:0006355
Lele49g0732 450 MobiDBLite consensus disorder prediction 352 378 - -
Lele49g0732 450 Pfam AP2 domain 249 298 IPR001471 GO:0003700|GO:0006355
Lele49g0732 450 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 169 448 - -
Lele49g0732 450 MobiDBLite consensus disorder prediction 340 378 - -
Lele49g0732 450 CDD AP2 247 307 IPR001471 GO:0003700|GO:0006355
Lele49g0732 450 Gene3D AP2/ERF domain 248 306 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0732 Lele-ChrLele49 4446326 4447755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0732 144 450 AP2-EREBP Transcription Factor Family AT1G64380 47.522 8.01e-66 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele49g0732 AP2 4.4e-13 CL0081