Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0727 ATGGATGATCATCCCCCAAAACAGTCAAGCTCTGAAGAAGTGAGCAGTATCGAGTGGGAGTTCATAAAGATGAGTGAGCAAGAGGAGGATCTCATCCGCAGGATGTTTAAGCTCGTCGGCAACAGGTGGGATTTGATAGCGGGACGTATTCCTGGTCGTAAAGCGGAAGAGATAGAGAGGTTCTGGATCATGAAACACAGTGAAGCTTTCTCTGCTGGAAGGATTGATCATGTCTGA 237 0.4726 MDDHPPKQSSSEEVSSIEWEFIKMSEQEEDLIRRMFKLVGNRWDLIAGRIPGRKAEEIERFWIMKHSEAFSAGRIDHV 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0727 78 FunFam MYB-like transcription factor 23 65 - -
Lele49g0727 78 Pfam Myb-like DNA-binding domain 24 63 IPR001005 -
Lele49g0727 78 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 23 66 - -
Lele49g0727 78 Gene3D - 25 65 - -
Lele49g0727 78 SUPERFAMILY Homeodomain-like 25 63 IPR009057 -
Lele49g0727 78 SMART sant 20 68 IPR001005 -
Lele49g0727 78 CDD SANT 23 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0727 Lele-ChrLele49 4426615 4427370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0727 24 62 MYB Transcription Factor Family AT5G52600 64.103 4.47e-13 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele49g0727 Myb_DNA-binding 7.1e-08 CL0123