Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0715 ATGGCATTTCTACGCATTTTCTATTCCATTTGCCTACTGGATCTGGTTCTCCGGCAAGGGAATGCAGAGCCTGTTGAAGATAAGCGAGCTTTGCTTGATTTTGTGAACCAGTTCTCTCACTCTCGCCCTTTAAATTGGAATGAGAACTCTTCTGTCTGTACTAATTGGACTGGAGTCGCTTGTAACGAAGATAAGTCCCGAGTAATAGCTGTTCGGCTGCCGGGAGTTGGATTTCATGGAGCAATTCCGCCCAACACAATTAGCCGCCTCTCAGCGCTGCAAATCGTGAGCCTCAGATCCAATTTTATCAGTGGGAGTTTCCCTTCTGTTTTTTCTGAGTTAAAAAACCTGTCTGTGCTGTATCTTCAATTTAACAACCTTTCGGGTTCTTTACCGGATTTCTCAGTCTGGAAGAATCTTACCATTGTCAACTTGTCGAATAATTGTTTCAATGGTAGCATTCCTTTCTCAATCTCTAATTTGACTGAGCTTGCTGGTTTGAATCTCGCAAACAACTCACTTTCCGGTGAAATTCCTGATATCCAATTGCCCAGATTGCAACAGCTGAATTTATCCAACAACAAGTTGAACGGCAGTGTGCCTAATTCTCTCCAGAGGTTTCCCATGTCAGCATTCCTCGGTAATAACATATCTTTCGGAAATTATCCTCACCTTCCTTCTGTACTTCCTCCTTCTTCCAAACCATCTTCAAAATCCAATAAATATGGAGGTCTCAGTGAAGCAGCACTACTAGGAATATCGATTGCTGCTGCTGTGCTTGCTCTTTTAGCATTTGGTTTTCTGATGTTTGTGTGCTTCTCAAGAAGGATGGACGACGATGGGTTCTCTGGGAAGTTGCAGAAGGGAGGGATGTCTCCAGAGAAAGAAGTTTCAAGAAATCAAGATGCGAATAATAAACTTGTTTTCTTTGAGGGATGTAACTATGCCTTTGACTTGGAGGACTTGTTAAGGGCTTCTGCTGAGGTACTGGGCAAGGGAACGTTTGGCACTGCATACAAGGCCATACTAGAGGATGCTTCCACAGTCGTCGTAAAGAGGCTGAAGGATGTAGCTGTTGGAAAAAAAGACTTTGAGCAACACATGGAGATTGTGGGAAGTCTTAAACATGATAATGTGGTTGAACTGAAAGCATATTACTATTCCAAGGATGAGAAACTGATGGTGTATGATTATTACAGTCAGGGGAGCCTCTCTTCTTTACTGCATGGTAAAAGAGGGGAGGATAAGGTGGCTTTTGATTGGGATAGTCGGCTTAAAATAGCACTAGGTGCTGCAAGAGGGATTGCTCGTATCCACACAGAGAATGGTGGAAAGATGGTGCATGGAAACATCAAATCTTCAAATATCTTTGTCAACTCTAAGCAATATGGTTGTGTGTCTGATCCTGGGTTGGCCATGATAATGAGCTCACTAGCCCTTCCCATCTCACGTGCTTCTGGCTATCGAGCACCCGAAGTTACAGACACCAGAAAAGCAGCACAGCCTTCAGATATTTACAGTTTTGGAGTGGTGTTACTGGAGCTTCTCACTGGTAAATCCCCCATACTTACCACAGGTGGGGATGAGATTGTCCACTTGGTGAGGTGGGTCCATTCAGTTGTGCGAGAGGAGTGGACAGCTGAAGTGTTTGACCTGGAACTCATGAGATATCCAAATATAGAAGAAGAGATGGTGGAGATGTTGCAGATAGCCATGGCATGCGTGACGAGGATGCCCGATCAAAGACCGAAGATTTCCGATGTTGTAAAGATGATAGAAAATGTGAGACAAGTTGATATGGAGAATCGTCCAACACCACCTGAGAGCCAAGCTGAAAGTGGAACACCAGCGTCAGTGTTAGGATTTTATTGGGTGATGGCCTCCAAGCGGATTTTAAAGGAGCTCAAGGATCTCCAGAAGGATCCTCCTACTTCTTGCAGCGCTGGCCCAGTGGCTGAAGACATGTTTCATTGGCAAGCTACAATTATGGGTCCTCCTGACAGTCCATATGCCGGTGGAGTATTTCTTGTCACCATCCATTTTCCTCCCGATTATCCATTCAAACCCCCGAAGGTTGCGTTCAGGACCAAGGTCTTTCACCCCAATATCAATAGCAATGGGAGCATCTGCCTTGACATATTGAAGGAGCAATGGAGCCCCGCACTAACAATTTCAAAGGTTTTGCTCTCGATCTGCTCCCTCTTGACAGACCCTAATCCTGATGATCCTCTGGTGCCTGAGATTGCTCACATGTACAAGACTGACAAGAGCAAGTATGAATCAACGGCTAGAAGCTGGACCCAGAAGTATGCTATGGGCTAG 2322 0.4492 MAFLRIFYSICLLDLVLRQGNAEPVEDKRALLDFVNQFSHSRPLNWNENSSVCTNWTGVACNEDKSRVIAVRLPGVGFHGAIPPNTISRLSALQIVSLRSNFISGSFPSVFSELKNLSVLYLQFNNLSGSLPDFSVWKNLTIVNLSNNCFNGSIPFSISNLTELAGLNLANNSLSGEIPDIQLPRLQQLNLSNNKLNGSVPNSLQRFPMSAFLGNNISFGNYPHLPSVLPPSSKPSSKSNKYGGLSEAALLGISIAAAVLALLAFGFLMFVCFSRRMDDDGFSGKLQKGGMSPEKEVSRNQDANNKLVFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDASTVVVKRLKDVAVGKKDFEQHMEIVGSLKHDNVVELKAYYYSKDEKLMVYDYYSQGSLSSLLHGKRGEDKVAFDWDSRLKIALGAARGIARIHTENGGKMVHGNIKSSNIFVNSKQYGCVSDPGLAMIMSSLALPISRASGYRAPEVTDTRKAAQPSDIYSFGVVLLELLTGKSPILTTGGDEIVHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMACVTRMPDQRPKISDVVKMIENVRQVDMENRPTPPESQAESGTPASVLGFYWVMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKSKYESTARSWTQKYAMG 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0715 773 SUPERFAMILY L domain-like 39 207 - -
Lele49g0715 773 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 626 772 IPR000608 -
Lele49g0715 773 PANTHER OS05G0588300 PROTEIN 7 604 - -
Lele49g0715 773 SUPERFAMILY Protein kinase-like (PK-like) 328 614 IPR011009 -
Lele49g0715 773 Gene3D Phosphorylase Kinase; domain 1 291 398 - -
Lele49g0715 773 SUPERFAMILY UBC-like 624 772 IPR016135 -
Lele49g0715 773 Pfam Protein kinase domain 327 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0715 773 ProSitePatterns Protein kinases ATP-binding region signature. 330 361 IPR017441 GO:0005524
Lele49g0715 773 FunFam Probable inactive receptor kinase RLK902 24 182 - -
Lele49g0715 773 Pfam Ubiquitin-conjugating enzyme 630 766 IPR000608 -
Lele49g0715 773 FunFam pollen receptor-like kinase 1 293 398 - -
Lele49g0715 773 Gene3D Transferase(Phosphotransferase) domain 1 399 611 - -
Lele49g0715 773 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 699 714 IPR023313 -
Lele49g0715 773 Gene3D Ubiquitin Conjugating Enzyme 624 773 IPR016135 -
Lele49g0715 773 Gene3D Ribonuclease Inhibitor 136 225 IPR032675 -
Lele49g0715 773 CDD UBCc 628 767 IPR000608 -
Lele49g0715 773 Gene3D Ribonuclease Inhibitor 26 135 IPR032675 -
Lele49g0715 773 ProSiteProfiles Protein kinase domain profile. 324 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0715 773 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 399 605 - -
Lele49g0715 773 SMART ubc_7 629 772 - -
Lele49g0715 773 FunFam Ubiquitin-conjugating enzyme 28, E2 626 773 - -
Lele49g0715 773 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0715 Lele-ChrLele49 4342092 4350286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0715 16 619 Receptor kinase-like Gene Family AT4G23740 64.952 0.0 786
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele49g0715 Pkinase 3.7e-34 CL0016