Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0685 ATGGATAAACTTGCGTGCTTGATGGAGTGGGATTTGCAAGCTATTGTAAGAGGGTTCACTGGCGAAGCCCCAGAAACAACAACAACCACGATCATAGATATCACACATCCTAATTTACCCAATTTCTGTTCTGAATTTCAAGTTCATCCCGATGATCCTTTCTGCAGTACTTTTCCAGAATTCTCAGAAACCACGATGGTGCTTGATGAATTGACAGAGCTTTACAAGCCTTTCTCAACTCAAACAATGACCACGACTTCCGTCGTACCCATCCCTAAAGAAGTCAAAGCATCATCAGAGGAAGTACAAGATTTGCATGAATCTCCAAGCAAAAGAAGCAAGAAGAACCAGAACAAGAGAATAGAGAAGCAGGTGAGAGAAGATGGACTATGCGACGCATGGGCATGGCGTAAATACGGTCAGAAACCGATCAAGGGATCGCCATATCCAAGAAGCTATTACAGATGTAGCAGCTCCAAAGGATGCATGGCGAGGAAACAAGTGGAAAGGAGCCATTTGGATCCTCAAGTTTTCATAGTTACTTATACTGCAGAACACAGTGATCATCACCCACCTCGATCCTCTCGCAAAACTAGGCACTCTAATATTATCCCACCACCTGAAACTAGTCAACAAACTTCTTCTGATCCTTTGGAAGACTCCATTATTGAAGATGAGCCAGTTGTGTCCACTGGGTCCAGCCAGTGCCTGAACAAAGATGCTGAAATTGGTGAGATTCTCACAAATGATGATGATTGGTTTCCAAGTCTAGATGAACTTGACGGACTTAGCCAAGAATTCGCGTTAGATGGTTACGACCTTCATGGCCGATTCTTAGACGTAGTTAAAAGATAG 855 0.4339 MDKLACLMEWDLQAIVRGFTGEAPETTTTTIIDITHPNLPNFCSEFQVHPDDPFCSTFPEFSETTMVLDELTELYKPFSTQTMTTTSVVPIPKEVKASSEEVQDLHESPSKRSKKNQNKRIEKQVREDGLCDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCMARKQVERSHLDPQVFIVTYTAEHSDHHPPRSSRKTRHSNIIPPPETSQQTSSDPLEDSIIEDEPVVSTGSSQCLNKDAEIGEILTNDDDWFPSLDELDGLSQEFALDGYDLHGRFLDVVKR 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0685 284 MobiDBLite consensus disorder prediction 99 124 - -
Lele49g0685 284 MobiDBLite consensus disorder prediction 183 218 - -
Lele49g0685 284 FunFam WRKY transcription factor 22 114 184 - -
Lele49g0685 284 MobiDBLite consensus disorder prediction 198 218 - -
Lele49g0685 284 Gene3D WRKY domain 113 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele49g0685 284 SMART WRKY_cls 130 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele49g0685 284 Pfam WRKY DNA -binding domain 132 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele49g0685 284 SUPERFAMILY WRKY DNA-binding domain 128 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele49g0685 284 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 82 216 IPR044810 GO:0003700
Lele49g0685 284 ProSiteProfiles WRKY domain profile. 125 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0685 Lele-ChrLele49 4149642 4150598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0685 1 193 WRKY Transcription Factor Family AT4G23550 46.729 1.05e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele49g0685 WRKY 8.2e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0685 49 4149642 4150598 Lele51g0704 51 4241144 4242100 hybridization
Lele49g0685 49 4149642 4150598 Lele52g0710 52 4459450 4460941 hybridization