Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0664 ATGGGATTCCCAGTGGGCTACACAGACCTAGTCTTCCCCAAGGTATTCCTTCACGTTCTCTCTCTTCTGGGTTTCGTTCGAAAGCTCATCACCATCCTCTTTCGCTACCTCGGGCTCCAAGATTTTCTCGAACCCGACATTGTTTGGCCACACCCGGTACCCGAATTCCAATCGGTATCCGCCATGCTCATCCGCGAAGTCCTGCCACTGGCCAAGTTCTCCGACCTGGTGGACCCGCCGGAAAGCTGCGCCGTGTGTCTCTACGAGTTCGAGGCGGACGACGAGATCAGGCGGCTGACCAACTGCAGGCACATATATCACCGAGGATGTCTGGACCGTTGGATGGGTTACGATCAGAGAACGTGTCCCTTATGTCGAACACCTTTCATACCTCACGATATGCAAGCTGCGTTCAATGATAGACTCTGGGCTGCTTCTGGCATTCCTGAATTCTACTCTGATTCTGACGAATATCCCTATCTTTCTTCTTTTTAG 495 0.5232 MGFPVGYTDLVFPKVFLHVLSLLGFVRKLITILFRYLGLQDFLEPDIVWPHPVPEFQSVSAMLIREVLPLAKFSDLVDPPESCAVCLYEFEADDEIRRLTNCRHIYHRGCLDRWMGYDQRTCPLCRTPFIPHDMQAAFNDRLWAASGIPEFYSDSDEYPYLSSF 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0664 164 SUPERFAMILY RING/U-box 63 132 - -
Lele49g0664 164 CDD RING-H2 83 126 - -
Lele49g0664 164 ProSiteProfiles Zinc finger RING-type profile. 83 126 IPR001841 -
Lele49g0664 164 SMART ring_2 83 125 IPR001841 -
Lele49g0664 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 129 IPR013083 -
Lele49g0664 164 PANTHER RING ZINC FINGER PROTEIN-RELATED 20 146 - -
Lele49g0664 164 Pfam Ring finger domain 82 126 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0664 Lele-ChrLele49 4042968 4043462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0664 1 147 C3H Transcription Factor Family AT1G63840 59.740 9.76e-63 189