Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0645 ATGGTACCGGAGAACCTGAAGAAACAACTCGCCTTGGCTGTGAGAAGCATCCAATGGAGCTACGCAATCTACTGGACTGGTTCACCTGAGAGCCCCGGGGCGTTCGAGTGGGGTGAAGGGTACTACAATGGGGACATAAAGACGAGGAAAACAAGCCAAGGAGTGGAACTTAATTCTGACCAAATAGGTTTAAGGAGGAGTGAGCAGCTCAGAGATCTATTTGAGTCCCTTGCAACTGCAGAATCAAGTCCACAAGCTAAAAGGCCTTCAGCTGCATTATCCCCTGAGGATCTCACTGATACAGAATGGTTGCCTGGAAGAACTCTGGTAAAAGGCCAACCCATTTGGCTGCACAATGCCCATTTGGCTGATAGTAGAATTTTTAGTCGCTCTCTTCTGGCAAAGAGTGCATCCATTCAGACAGTGGTATGCTTTCCTTTTCTGGATGGTGTTCTTGAGTTAGGTACAATCGATCTGGTCTCGGAGGACCTCAGTCTCATTCAATGCATGAGAACTTCTTACTTGGATATTGCTGGCGCAGTATTTGATCATAATGCTGAGTCAGAATATGAAGTAGCCAAGGCAATTTCTCCCAATAATAGTTCAAATGACTTTCAAGCCAATAAACAAGCAGATGAGAGATTCATGGCTGAAAAAATAAATGGTGTTGCTTCCCACAATGTCCAAAACTGGCAAGTGATGGAGGATGAGTTGAGGAATTGTGCCCATACTTCCATGAATTCTAGTGACTATATATCTCAAACTTTTGCTGGTTCTGGAAAGAATAATGCTTCTGTTCCCAAGGGCGATCATCGTGGGCAAGATCTTCAAGAGGGCAACAAAAGCACGAAAATGACCGTGGTGGATGTTCATATTGATGATTGGCATTATCAAAGAGTTCTTTCTTCTCTTCTTAAAATCTCAGACCAATTAATTATGGGAGCACATTTTCAAAACTTCCATTGTGAATCCAGCTTTGTGAGTTGGAAGAAAGAAGGACCAACGGGTGGTTGTCAATGGCCAAGAGGAGGGACTTGCCAAAATTTATTGAAGAAGGTATTGTTTGAAGTTCCTCGTATGCACACGGATTGGTTGCTTGAGTGTCAAGAAGAAAATGACTATAAAGAGGGAATGAGACCTGAAGCTGCTGATGAAATTGGCTTTAACCATGTACTGTCTGAAAGAAAGAGAAGAGCAAAACTAAATGAAAGGTTTTTAACCCTTAAATCAATGGTTCCTTTGATTACTAGGGATGACAAAGTTTCAATACTAGATGAGGCAATAGAATACCTTAAAAAGCTGGATAAAAGGGTGAGAGACTTGGAAGCTCGCCGGGAAACCAAAGATTCAGAGACAAGAACTAAAAGAACACGTCAAGATGTTGTAGAAAGGACTTGTGATAATTATTGTAACAATAGATCTGATAATGGCAAGAAACCAGCAATGAACAAAAGGAAGGCTTGTGACATTGATGAGACAGAGACAGAGATTGATTCAGTTCGTCTAAAAGATATTTCTAATAATGTTACTATCTGTATGAATGACAATGAGGTTTTGATTGAATTGAAGTGTCCTTGGAGAGAAGGTGTTCTACTAGAAATAATGGAAGCAGTCAGCAATCTTCATTTAGACTTTCATTCAGTTCATTCATCGGAAGCTGATGGGACTCTCTATTTAACCATGAAATCCAAGATCAGAGGAGCAGCTTTTACCTCAACAAAAAAGATCAAACAAGCACTGCTCAAGGCAGCTTGGAAGTGTTGA 1764 0.4116 MVPENLKKQLALAVRSIQWSYAIYWTGSPESPGAFEWGEGYYNGDIKTRKTSQGVELNSDQIGLRRSEQLRDLFESLATAESSPQAKRPSAALSPEDLTDTEWLPGRTLVKGQPIWLHNAHLADSRIFSRSLLAKSASIQTVVCFPFLDGVLELGTIDLVSEDLSLIQCMRTSYLDIAGAVFDHNAESEYEVAKAISPNNSSNDFQANKQADERFMAEKINGVASHNVQNWQVMEDELRNCAHTSMNSSDYISQTFAGSGKNNASVPKGDHRGQDLQEGNKSTKMTVVDVHIDDWHYQRVLSSLLKISDQLIMGAHFQNFHCESSFVSWKKEGPTGGCQWPRGGTCQNLLKKVLFEVPRMHTDWLLECQEENDYKEGMRPEAADEIGFNHVLSERKRRAKLNERFLTLKSMVPLITRDDKVSILDEAIEYLKKLDKRVRDLEARRETKDSETRTKRTRQDVVERTCDNYCNNRSDNGKKPAMNKRKACDIDETETEIDSVRLKDISNNVTICMNDNEVLIELKCPWREGVLLEIMEAVSNLHLDFHSVHSSEADGTLYLTMKSKIRGAAFTSTKKIKQALLKAAWKC 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0645 587 PANTHER TRANSCRIPTION FACTOR TT8 2 582 - -
Lele49g0645 587 Gene3D - 387 447 IPR036638 GO:0046983
Lele49g0645 587 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 388 447 IPR036638 GO:0046983
Lele49g0645 587 SMART finulus 391 440 IPR011598 GO:0046983
Lele49g0645 587 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 172 IPR025610 -
Lele49g0645 587 Pfam Helix-loop-helix DNA-binding domain 390 434 IPR011598 GO:0046983
Lele49g0645 587 MobiDBLite consensus disorder prediction 258 279 - -
Lele49g0645 587 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 385 434 IPR011598 GO:0046983
Lele49g0645 587 Coils Coil 424 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0645 Lele-ChrLele49 3903958 3906916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0645 2 587 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 45.300 2.97e-172 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele49g0645 bHLH-MYC_N 6.1e-33 CL0161