Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0637 ATGACATCTCTTAGTAAATGCATGGATGGGAGAGAAGCCATGGCATTCTCTGGAGGTCCCCCTTCATATTACATGCATAGAGGGGGTATTGTTGGGTCTGTCTCTGGAACACATTCCGGAGGGTTTCAAGTGCCTTCTGGGTTTATACCAAACGCCGGCATTCCAGCACAGTCAAATGTAAGAGGTAGCTCAATGGGTTCTACAGTTACTGTAGAACCTGCTCATACCAATTATAGTCATGGTCATGGCATTAGCATTAGTTCGTCTCCTGGAGTGCCTCCTTCGAGCGAGCGTGTGAAAAAGAAACGAGGAAGGCCCCGTAAATACCGTCCTGATGGACCCGTTTGTCTGGGTCTGTCTCCCATGTCTGCCCCTGCAAATTCTACCCATGCCTCGAGCACTCCGTCCCAGAAACGTGCTAGAGGGCGCCCACCTGGAAGTGGAAGGAAACAACAACTAGCCTCGCTTGGTGAATGGATGAACAGTTCTGCTGGAATGGCTTTTGCACCTCATGTTATCACGATTGGAGCGGGGGAGGACATTGTAGCAAAGTTACTGTCCATTTCGCAGCAGAGACCTAGGGCACTGTGCATCTTGTCAGGTACTGGTACAGTTTCATCAGTTACTCTGCGGCAGCCTGCTTCTACTGTTGTCAGCATCACACTCGAGGGTCGATTCCAAATATTACGCTTGTCTGGTTCTTACCTAGTTGCCGAAGATGGTGGACACCGCAATAGAACAGGTGGCTTGAGTGTTTCGCTTGCTAGTCCTGATGGTCATGTTATTGGCGGTGGGGTTGCTGTGCTTATTGCTGCAAGCCAAGTGCAGGTGGTAGTGTGCAGTTTTCTATATGAAGGGTCCAAGACCAAGACTAAGCAAGAGAGTGCCCCGCAGGGCGATGTTTCTGAAGCTGAGCATGATAACAAGTTAGCTACTCCGGCGAGTGCTCCACCATCTCAAAACTACATTCAACCACCAACAAGAGGCATTTGGCCATCCGATCTAAAAAGTACACATACTGGTATTGACTTGATGCGTGGATAA 1044 0.4933 MTSLSKCMDGREAMAFSGGPPSYYMHRGGIVGSVSGTHSGGFQVPSGFIPNAGIPAQSNVRGSSMGSTVTVEPAHTNYSHGHGISISSSPGVPPSSERVKKKRGRPRKYRPDGPVCLGLSPMSAPANSTHASSTPSQKRARGRPPGSGRKQQLASLGEWMNSSAGMAFAPHVITIGAGEDIVAKLLSISQQRPRALCILSGTGTVSSVTLRQPASTVVSITLEGRFQILRLSGSYLVAEDGGHRNRTGGLSVSLASPDGHVIGGGVAVLIAASQVQVVVCSFLYEGSKTKTKQESAPQGDVSEAEHDNKLATPASAPPSQNYIQPPTRGIWPSDLKSTHTGIDLMRG 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0637 347 Gene3D - 170 302 - -
Lele49g0637 347 Pfam Plants and Prokaryotes Conserved (PCC) domain 170 282 IPR005175 -
Lele49g0637 347 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 75 318 IPR039605 GO:0003680
Lele49g0637 347 MobiDBLite consensus disorder prediction 122 140 - -
Lele49g0637 347 MobiDBLite consensus disorder prediction 291 347 - -
Lele49g0637 347 ProSiteProfiles PPC domain profile profile. 163 307 IPR005175 -
Lele49g0637 347 SUPERFAMILY AF0104/ALDC/Ptd012-like 167 285 - -
Lele49g0637 347 MobiDBLite consensus disorder prediction 59 153 - -
Lele49g0637 347 CDD DUF296 170 282 IPR005175 -
Lele49g0637 347 MobiDBLite consensus disorder prediction 313 334 - -
Lele49g0637 347 MobiDBLite consensus disorder prediction 59 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0637 Lele-ChrLele49 3842122 3846060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0637 8 347 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 48.831 1.01e-95 287