Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0628 ATGAAGTTATGCGCTTCAGTGTTGTTTCTCGGTCTAATTTCCATGGTCTCTTTTGCAACTTGTGATACTGTACCCTCAAATGAAGTTTGGCCGCTCACAGCCTTTAAAGAGGCTGTATATGAAGACCCTTACCTAGTTCTGTCTAACTGGAATACGCTGGATTCAGATCCTTGTGAATGGTTTGGCGTTTCTTGCACTAAAGATCGAGATCATATCATTAAGCTAAATATTTCGGGGTCATCATTTAGAGGATTTCTGGCGCCTGAATTGGGACAAATCACCTACTTGCAAGAACTGTATGCTCTATGTTTCTCCTTTTTACATGTCAACCTGATAACCTATCTTTTGATCGTTGCTATTGCCACGTGCCATAGTCTTGGATTTGGGGAAGAATCAGTATCTGGACCAATTCCTCCAGAGATTGGGAATCTACCTGAAGTTGTTAAAATAAACCTGCAGTCCAATGGGTTGACTGGTAGGCTACCTCAAGCAATTGGAAATTTGAAATACCTTCAAGAACTTAGGCTGGACAGGAATAAACTTCAAGGACCAGTTCCTGCTGGTAGCAGTTCAAACTTTTCCCCGAATACGCGTGGAATGTACGCCTCAAATGCAAATTTAACTGGTCTCTGTCGATCATCTCAGTTAAAAGTTGCAGATTTTTCATATAACTTCTTCGTAGGTAGCATACCCGCTTGCTTGGAGTATCTACCTAGGTCTAGATTTCAAGGGAACTGCTTCCAAAGCAATGAATTAAAGCAGCGTTCTTCATTGCAATGTGCTGGCGCTTCACCTGCCAAGAGCCATTCTGTGGCCAATCCAAAGCATCGACCTGCTGAATATGTGGCCAAGCGTCATAAAGCGTCCCAACCTGTCTGGATTTTGGCTCTAGAAATAGCGACGGGAACTTTGGTTGGTTCTATCTTTCTGGTTGCAGTTCTTGCTGCTTTTCTTAAATTTGACAACAAAGCATCTATCATTTGGCCTTGGAAGAAATATGCAAGCCGGAAGGAGCATATGGCAGCAGTATATATAGACTCTGAGATGCTGAAGGATGTGAGGAGTTTCAGCAGACAAGAGCTTGAAGTGGCATGTGAAGACTTCAGCAACATTATTGGGTCCTCACCAGATAGTGTAGTCTACAAAGGCACCATGAAAGATGGAGAAGGGAGCCAGTTGTCATGGACACGGCGTATGAGAATCATTATTGGCATTGCACGTGGACTGAAGTATCTACACACGGAAGTTGACCCTCCATTCACTATATCGGAGCTGAATTCTAGTGCTGTATACCTTACAGAAGATTTTTCCCCTACGCTGGTTGATTTTGAGAGTTGGAAGACAATACTTGAAAGGTCAGAAAAGAATTCTGAATCTGTTGGAAGCCAAGGTGCTGTTTGTGTTCTTCCACATTCTCTCGAGGCACGCCATCACGATCCGCAGGGAAATATATATGCTTTTGGCATACTTCTACTGGAGATAATAAGTGGGAGACCTTCATATTGCAAGAATAAAGGCTCCTTGGTAGATTGGGCTAAAGAGTATCTAGAAATGCCAGAAGTAATGTCATATGTGGTGGATCCAGAGTTGAAACATTTCAGATACGAGGACCTCGCAGTAATATGCGAGGTAGTAAATCTCTGTATCAATCCGGACCCGACCAAGCGTCCATCGATGACAGAAATATGCAGTATGCTGGAAAGCAGGATTGACGCATCGATGAGCGTGGATTTCAAGTCTTCATCTTTGGCTTGGGCTGAACTTGCACTTTCTTAA 1776 0.4319 MKLCASVLFLGLISMVSFATCDTVPSNEVWPLTAFKEAVYEDPYLVLSNWNTLDSDPCEWFGVSCTKDRDHIIKLNISGSSFRGFLAPELGQITYLQELYALCFSFLHVNLITYLLIVAIATCHSLGFGEESVSGPIPPEIGNLPEVVKINLQSNGLTGRLPQAIGNLKYLQELRLDRNKLQGPVPAGSSSNFSPNTRGMYASNANLTGLCRSSQLKVADFSYNFFVGSIPACLEYLPRSRFQGNCFQSNELKQRSSLQCAGASPAKSHSVANPKHRPAEYVAKRHKASQPVWILALEIATGTLVGSIFLVAVLAAFLKFDNKASIIWPWKKYASRKEHMAAVYIDSEMLKDVRSFSRQELEVACEDFSNIIGSSPDSVVYKGTMKDGEGSQLSWTRRMRIIIGIARGLKYLHTEVDPPFTISELNSSAVYLTEDFSPTLVDFESWKTILERSEKNSESVGSQGAVCVLPHSLEARHHDPQGNIYAFGILLLEIISGRPSYCKNKGSLVDWAKEYLEMPEVMSYVVDPELKHFRYEDLAVICEVVNLCINPDPTKRPSMTEICSMLESRIDASMSVDFKSSSLAWAELALS 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0628 591 Gene3D Ribonuclease Inhibitor 26 257 IPR032675 -
Lele49g0628 591 Pfam Leucine rich repeat N-terminal domain 32 65 IPR013210 -
Lele49g0628 591 PANTHER PROTEIN MALE DISCOVERER 2 387 589 - -
Lele49g0628 591 Pfam Protein kinase domain 398 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0628 591 ProSiteProfiles Protein kinase domain profile. 236 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele49g0628 591 SUPERFAMILY Protein kinase-like (PK-like) 390 567 IPR011009 -
Lele49g0628 591 Gene3D Transferase(Phosphotransferase) domain 1 382 582 - -
Lele49g0628 591 SUPERFAMILY L domain-like 32 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0628 Lele-ChrLele49 3811977 3815517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0628 1 515 Receptor kinase-like Gene Family AT2G23950 25.085 5.84e-33 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lele49g0628 Pkinase 3.7e-08 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0628 49 3811977 3815517 Lele51g0648 51 3918484 3922043 hybridization
Lele49g0628 49 3811977 3815517 Lele52g0649 52 4119058 4122710 hybridization