Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0605 ATGGCGTCATCGTCGTCTTCCAAGAGCAAGAGGCACCCGCTGTACCATGGGATTCGCTGCCGTGGTGAAAAATGGGTGTCTGAAATACGGGAGCCACGTAAGGATTCTCGTATATGGCTCGGGACGTTCCCGACGCCTGAGATGGCGGCCGCCGCATATGACGTGGCGACGTTAGCTCTCAAAGGCAGCGACGCAGTCCTGAACTTCCCCGACTGGGTCGGGATTTATCCGGTGCCAGGTTCTTCATCTGCTGCTGACATTCGCAGCGCCGCCGCAGCTGCAGCCGCACTCATGGCACCTCAAGAACAGACTCAAACCAATGACGACCCTGCCGATGTTAATCATGGGAATGAGAGCAATTTTTCGTGGTCTGAAACAAATCCGTTTGTGGACGAGGAAGCCATATTCGACATGCCAAATTTGCTGGTGGACATGGCCGGAGGAATGCTGCTATCTCCTCCCAGAATCGACCCACCACTGTCCGATAACTCTCCGGACGACCATAGGTCGTACGGAGGAACTTTGTGGAACCATTTTTGA 540 0.5463 MASSSSSKSKRHPLYHGIRCRGEKWVSEIREPRKDSRIWLGTFPTPEMAAAAYDVATLALKGSDAVLNFPDWVGIYPVPGSSSAADIRSAAAAAAALMAPQEQTQTNDDPADVNHGNESNFSWSETNPFVDEEAIFDMPNLLVDMAGGMLLSPPRIDPPLSDNSPDDHRSYGGTLWNHF 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0605 179 CDD AP2 13 71 IPR001471 GO:0003700|GO:0006355
Lele49g0605 179 Gene3D AP2/ERF domain 14 71 IPR036955 GO:0003700|GO:0006355
Lele49g0605 179 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 7 176 IPR045277 GO:0003700
Lele49g0605 179 SUPERFAMILY DNA-binding domain 14 71 IPR016177 GO:0003677
Lele49g0605 179 SMART rav1_2 14 78 IPR001471 GO:0003700|GO:0006355
Lele49g0605 179 MobiDBLite consensus disorder prediction 154 179 - -
Lele49g0605 179 Pfam AP2 domain 15 62 IPR001471 GO:0003700|GO:0006355
Lele49g0605 179 ProSiteProfiles AP2/ERF domain profile. 14 70 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0605 Lele-ChrLele49 3672939 3673478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0605 4 178 AP2-EREBP Transcription Factor Family AT5G52020 51.366 2.77e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele49g0605 AP2 3.8e-08 CL0081