Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0604 ATGAACGCTTTCGGATCTTTCACAAGTAACTTAGAGTCGTCTCACTCCGACGAAGAAGCGATCACATTAGCGTCGGAGAAACCGAAGAAGCGAGCCGGACGAAGGGTGTTTAAGGAGACAAGACATCCTGTGTACCGAGGAGTTCGTCGCCGGGACAACGACAAATGGGTCTGCGAGGTTCGTGTTCCTAATAATAACAAACTAAGGATCTGGCTTGGAACTCATTTGACTCCCGAGAAAGCCGCCAGAGCACATGATGTTGCTGCTCTCGCGCTCCGTGGTAAGTCGGCGTGTCTCAATTTTGCAGACTCCGCGTGGCGGTTTCCGGTGCCGGCGTCCACCGATCCGGATGAGATAAGGCGAGTGGCGGTGGAGGCGGTGGAGGCATTTGACGACGAAGTGTGTAGTAGCAGTATGGGGACAATGGGATCATCAGAAGAAGCTAATGCTGGTATGAGTGTGGAATTAGAAGGGTATGTGAATGGAGTTTCATGGTTTGAAGATGACCAGGTTTTGTTTAGCATGGCGGATGAGCCGTTGAGATCACCGCCGGCTGCTTATTCTCTGGGAACACATGGGTGGGACTGGAGAGACGAAGTAGACCAGGTGGATAATGAGGTTTCACTTTGGAGCTTTACCATTTGA 645 0.5132 MNAFGSFTSNLESSHSDEEAITLASEKPKKRAGRRVFKETRHPVYRGVRRRDNDKWVCEVRVPNNNKLRIWLGTHLTPEKAARAHDVAALALRGKSACLNFADSAWRFPVPASTDPDEIRRVAVEAVEAFDDEVCSSSMGTMGSSEEANAGMSVELEGYVNGVSWFEDDQVLFSMADEPLRSPPAAYSLGTHGWDWRDEVDQVDNEVSLWSFTI 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0604 214 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 9 211 IPR045277 GO:0003700
Lele49g0604 214 CDD AP2 45 104 IPR001471 GO:0003700|GO:0006355
Lele49g0604 214 PRINTS Ethylene responsive element binding protein signature 45 56 IPR001471 GO:0003700|GO:0006355
Lele49g0604 214 PRINTS Ethylene responsive element binding protein signature 84 104 IPR001471 GO:0003700|GO:0006355
Lele49g0604 214 Gene3D AP2/ERF domain 44 103 IPR036955 GO:0003700|GO:0006355
Lele49g0604 214 Pfam AP2 domain 43 94 IPR001471 GO:0003700|GO:0006355
Lele49g0604 214 SUPERFAMILY DNA-binding domain 44 104 IPR016177 GO:0003677
Lele49g0604 214 SMART rav1_2 44 108 IPR001471 GO:0003700|GO:0006355
Lele49g0604 214 MobiDBLite consensus disorder prediction 1 18 - -
Lele49g0604 214 MobiDBLite consensus disorder prediction 1 21 - -
Lele49g0604 214 ProSiteProfiles AP2/ERF domain profile. 44 102 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0604 Lele-ChrLele49 3666083 3666727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0604 21 212 AP2-EREBP Transcription Factor Family AT1G63030 53.125 1.73e-61 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele49g0604 AP2 9.6e-12 CL0081