Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0598 ATGACGTCGTCTCAGGAGCATGACATGGATCAAGACGACGATGGTGGAACCTCCGACCTCAGCACCAGCGCGGGCGATCCTGTGGCCATCAACACCGACAAAAACAATGGCCTTTGCAAAGAGCCTGTTTCTGATGATCCCTTGGCTTTCCAGGTCTTGCAGTTGAAGGAGGAGCCCGTTGATTCGGACTCAGACCAGCAACAAAAGATGCAGCCTTCTTCGTCGCCTCCGATTGGAGTCGTTCCTGTCGCGAGGCAGATGCAAATGCCCCTAACTATGCCCATGCCCATGCCGGTCGCTACCGCGAGACGCTCCTCCACCAAGGACCGCCACACGAAGGTGGAAGGCCGGGGACGTAGGATCCGAATACCCGCCACTTGCGCGGCTCGGATCTTTCAGCTGACTCGGGAGTTAGGTCATAAGTCTGATGGCGAGACCGTGCGGTGGCTCCTCGAACACGCGGAGGAGGCCATCATCGCGGCCACCGGCACAGGCACCGTCCCAGCTATCGCTGTCTCCGTCGGGGGAACTCTGAAGATTCCTACAACATCTAGCGCCAACAGCAATCAGGACTTCGAACTCAGGAAGAAGCGGAAAAGGCCTTCGAACAGTGAGTTTGTGGACGTGAGTGAAGCCGTTTCACAATCGTCCGGTTTGGCCCCGGTTCAATCGGCTCTTCCGCAAGGCCTTGTGCCTGTGTGGGCAGTGGGCAACGCGAATATGATGATCCCGGCGAACGCCTTTTGGATGATCCCTCCGGCGGCGGTGACGCCGCCTGTGGGAGGAAATCCGGGATCGTCAAACCAACAACCTCAGATATGGACTCTATCGCCGACGGTGACGCCCGTATTCAACGTGTCAGCGAGACCCGTATCGTCTTTGGTGGCAGCAACAACAAACACCTCGAGCGGCATAGAAGTCGCGCCGGTGGGATGCAACAATTCGTCCAACACAGCAGCGGTGAGCACGAGCACGGTGGGGCCAACGGCAGCAAAGAAATCGACGATGGCACCGAGCGTTAGTGGTAGTGGGGTCACGGGAAGTAGTAGTAGCAGCGGAAGCAAGGCGCGGACGTTGAGGGAATTTTCACTGGAGATTTACGATAAGCGAGAGTTGCAGTTGATGGGGCGGTCAGGGAATAATAAGCAAGCGTAA 1155 0.5732 MTSSQEHDMDQDDDGGTSDLSTSAGDPVAINTDKNNGLCKEPVSDDPLAFQVLQLKEEPVDSDSDQQQKMQPSSSPPIGVVPVARQMQMPLTMPMPMPVATARRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEEAIIAATGTGTVPAIAVSVGGTLKIPTTSSANSNQDFELRKKRKRPSNSEFVDVSEAVSQSSGLAPVQSALPQGLVPVWAVGNANMMIPANAFWMIPPAAVTPPVGGNPGSSNQQPQIWTLSPTVTPVFNVSARPVSSLVAATTNTSSGIEVAPVGCNNSSNTAAVSTSTVGPTAAKKSTMAPSVSGSGVTGSSSSSGSKARTLREFSLEIYDKRELQLMGRSGNNKQA 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0598 384 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 62 373 IPR005333 GO:0003700
Lele49g0598 384 ProSiteProfiles TCP domain profile. 107 161 IPR017887 -
Lele49g0598 384 MobiDBLite consensus disorder prediction 16 30 - -
Lele49g0598 384 MobiDBLite consensus disorder prediction 191 205 - -
Lele49g0598 384 MobiDBLite consensus disorder prediction 1 80 - -
Lele49g0598 384 MobiDBLite consensus disorder prediction 183 205 - -
Lele49g0598 384 Pfam TCP family transcription factor 106 193 IPR017887 -
Lele49g0598 384 MobiDBLite consensus disorder prediction 318 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0598 Lele-ChrLele49 3602172 3603326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0598 103 381 TCP Transcription Factor Family AT2G45680 52.131 2.74e-73 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele49g0598 TCP 4.2e-28 No_clan