Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0574 ATGGGTTCTCAGCAGAATGATGGTACGAGCTACCCGCCTTCGGAGCCGAAGCCATGCGCTAACAACTGTGGATTCTTTGGCACCGCCGGCACCATGAACCTCTGTTCTAAATGTTACAGAGACTTCCAAATCAAAGAGCAGCAAGCTGCTTCCGCTAAAGCCGTCATGGAGAAATCACTCAACCCTAGATCCGTTCCCTTACCTAATCAGACGCTGGAATCGGGTCCTTCAGCACAATTCCTCCTCGGAATTCCTTCGTCTTCATCGTCGGCGGTTCTCGTCGGCGATCAAGGGCAGCCAAAGGCAGCGAACCGTTGTAGCTGTTGTAACAAGAAGGTTGGGTTGACAGGATTCACGTGCAAGTGTGGGAGCACTTTCTGCGGGGCGCATCGTTATCCGGAGAAGCACGAGTGTACATATGACTTCAAGGTTTCTGGCCGTGATGCGATTGCAGAGGCTAATCCAGTGGTAAAAGCCCCTAAACTAGACAAGATTTAG 498 0.5141 MGSQQNDGTSYPPSEPKPCANNCGFFGTAGTMNLCSKCYRDFQIKEQQAASAKAVMEKSLNPRSVPLPNQTLESGPSAQFLLGIPSSSSSAVLVGDQGQPKAANRCSCCNKKVGLTGFTCKCGSTFCGAHRYPEKHECTYDFKVSGRDAIAEANPVVKAPKLDKI 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0574 165 Pfam A20-like zinc finger 18 40 IPR002653 GO:0003677|GO:0008270
Lele49g0574 165 ProSiteProfiles Zinc finger AN1-type profile. 100 146 IPR000058 GO:0008270
Lele49g0574 165 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 19 64 - -
Lele49g0574 165 Gene3D - 85 161 IPR035896 -
Lele49g0574 165 FunFam Zinc finger AN1-type containing 6 85 161 - -
Lele49g0574 165 Gene3D - 2 63 - -
Lele49g0574 165 Pfam AN1-like Zinc finger 106 142 IPR000058 GO:0008270
Lele49g0574 165 SUPERFAMILY AN1-like Zinc finger 98 160 IPR035896 -
Lele49g0574 165 ProSiteProfiles Zinc finger A20-type profile. 13 47 IPR002653 GO:0003677|GO:0008270
Lele49g0574 165 PANTHER AN1-TYPE ZINC FINGER PROTEIN 16 165 - -
Lele49g0574 165 SMART AN1_Zf_4 106 143 IPR000058 GO:0008270
Lele49g0574 165 SMART A20_3 16 40 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0574 Lele-ChrLele49 3476949 3477446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0574 13 165 C2H2 Transcription Factor Family AT3G52800 47.205 3.05e-38 127