Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0573 ATGGCAGTGCGTGCTATACTAAATGCTGGCTTAGCGATGATTGGGCGTTTTATTCGATCTCTTACAAGTCAAAGCAGTAGTGAAGGGCCAGCAATTATTAAAGGACTAGCAATGGATCCAATGGCAGGGCATGGGCACTCTCTTCCTCCACCATTCCATATGCACCAGCAAACCCAGCATGGGCATCAATTTCAGTCTCTGCACCAAAATGCAGAAGAAGAACAAAGCGGAAGCAGCAGTGGCCTCAACCTCGCCCACAAGAGAGAACGCGAAGAAACCAGCCACAACAATAATACCGATCAAGGCAATATGAATGGGGAAGGTGGAGAAATCTCCAGAAGGCCTCGAGGAAGACCTGCCGGGTCCAAGAACAAACCCAAACCACCCATCATCATAACCCGAGACAGTGCCAATGCCCTTAGAACCCACGTCATGGAGGTAGCTGACAGTTCTGACATCGTCGAGAGCGTTTCCAGCTTCGCCAGGAGACGCCAGAGAGGGGTTTGTATTATGAGCGGCGCTGGCACCGTCACCAACGTCACCTTGAGGCAACCCGCTTCTTCCGGTGCTGTCGTCACTCTTCACGGGAGGTTCGAGATCTTGTCGCTCGCTGGCTCCTTCTTGCCGCCGCCGGCTCCACCGGCCGCTTCAGGTTTGACCATATATTTGGCTGGCGGACAAGGTCAGGTGGTCGGGGGAACCGTGGTGGGCACGCTCATGGCTGCGGGACCGGTGGTGATCATGGCGGCGTCTTTTAGCAACGCTGCGTACGAGAGGCTTCCTTTGGAGGAAGAAGACCCATCGACGGCGATTCAAGGGACCGGAATTGGGTCACCAGGAGGAGTTGGTCAGCAGCAGCAACTGTTATTAGGGGACGCATCAGCTCCACTCATGCATGCTTTGCCTCCTAATCTTCTGAATTCTATGCAGATGGCGTCTGATCAACCTTTCTGGGCTAATGCTCGTCCTCCATTCGGATGA 981 0.5392 MAVRAILNAGLAMIGRFIRSLTSQSSSEGPAIIKGLAMDPMAGHGHSLPPPFHMHQQTQHGHQFQSLHQNAEEEQSGSSSGLNLAHKREREETSHNNNTDQGNMNGEGGEISRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEVADSSDIVESVSSFARRRQRGVCIMSGAGTVTNVTLRQPASSGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGTVVGTLMAAGPVVIMAASFSNAAYERLPLEEEDPSTAIQGTGIGSPGGVGQQQQLLLGDASAPLMHALPPNLLNSMQMASDQPFWANARPPFG 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0573 326 FunFam AT-hook motif nuclear-localized protein 140 267 - -
Lele49g0573 326 MobiDBLite consensus disorder prediction 52 83 - -
Lele49g0573 326 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 71 319 IPR014476 GO:0003680
Lele49g0573 326 ProSiteProfiles PPC domain profile profile. 137 277 IPR005175 -
Lele49g0573 326 MobiDBLite consensus disorder prediction 38 130 - -
Lele49g0573 326 CDD DUF296 141 208 IPR005175 -
Lele49g0573 326 Pfam Plants and Prokaryotes Conserved (PCC) domain 141 254 IPR005175 -
Lele49g0573 326 Gene3D - 140 272 - -
Lele49g0573 326 SUPERFAMILY AF0104/ALDC/Ptd012-like 137 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0573 Lele-ChrLele49 3469199 3471858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0573 38 325 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 55.015 5.33e-84 255