Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0568 ATGGAAGCCAGGGATGGAATTAGCAGTGCAGTCACGGTGGTCGGATCAGATGATCCGTCGGAGTACCATGTAGCTCCCCGGACCGAGAACCCAGCAACCACTGGTGGATCGACAACGCGAACGCCGGCTCCGGCGACTCAAGGGAGTGCTCCTCCGCCGCAGACGGCAGCAGCGGGAGGTACGCCGGGAACCATGACGATGCCGGGGAAGAAGAAAAGAGGCCGACCGAGAAAGTACGGACCCGACGGGTCGGTGACCATGGCTCTATCTCCTAAACCAATATCCTCTTCGGTTCCACCCCAAGTCATCGATTTCTCCGCAGATAAGCGCGGGAAAGTTCGTCCAGCTAGTTCGGTCAGCAAATCCAAATTCCAGGTCGAGAATTTAGGGGAATGGGTTGCATGCTCTGTAGGTGCTAATTTTACCCCCCATATAATCACCGTTAATGCTGGGGAGGACGTTACTATGAAGATAATATCATTTTCTCAGCAAGGACCTCGAGCTATATGTATTCTTTCTGCAAATGGAGTCATATCAAGTGTCACGCTTCGTCAACCTGATTCTTCTGGCGGCACACTGACCTATGAGGGACGTTTTGAAATTCTGTCGTTGTCTGGGTCCTTCATGCCAAGTGAAAGTGGGGGAACACGGAGCAGATCTGGCGGCATGAGCGTTTCGTTGGCAAGTCCAGATGGTCGTGTTGTAGGTGGTGGAGTGGCAGGCCTATTAGTAGCAGCAGGTCCTGTTCAGGTAGTGGTAGGAAGCTTTCTGGCAGGAAACCAGCATGAGCAAAAGCCAAAGAAACAGAAAATAGAGGTCATAACCACAGCCATACCAACTGCTGTTGTTCCCTTGTCTAGTGTTGTTACCGATCCGGTCCCTCTCCTCACCTCTTCTTCTTCCTTCCGTGGCGATAATTGGTCAGCAATCCAAGCAGATAACAGGAATAACATCGCCGCCACGGCCAACACCAACAATAATAATAATGGTAATAATAATAATAAGTCAGCTGATATTAACGTGTCACTGTCTGGAGGTTTCACCAATCTCAGTCGTTCGATGTCTTTTGAAGTGATGTTTTGGGAGGACGTGGAAATTTGCAATGAAGTTGGGTTTGGCATATTTGGAACTGATAAGTGTATCAGTTGCCCCCTATGTTTGGATGGGGAGAAAGAATATTAG 1182 0.4966 MEARDGISSAVTVVGSDDPSEYHVAPRTENPATTGGSTTRTPAPATQGSAPPPQTAAAGGTPGTMTMPGKKKRGRPRKYGPDGSVTMALSPKPISSSVPPQVIDFSADKRGKVRPASSVSKSKFQVENLGEWVACSVGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSESGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAAGPVQVVVGSFLAGNQHEQKPKKQKIEVITTAIPTAVVPLSSVVTDPVPLLTSSSSFRGDNWSAIQADNRNNIAATANTNNNNNGNNNNKSADINVSLSGGFTNLSRSMSFEVMFWEDVEICNEVGFGIFGTDKCISCPLCLDGEKEY 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0568 393 FunFam AT-hook motif nuclear-localized protein 1-like 143 273 - -
Lele49g0568 393 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 39 321 IPR039605 GO:0003680
Lele49g0568 393 Pfam Plants and Prokaryotes Conserved (PCC) domain 143 256 IPR005175 -
Lele49g0568 393 MobiDBLite consensus disorder prediction 30 54 - -
Lele49g0568 393 Gene3D - 143 276 - -
Lele49g0568 393 ProSiteProfiles PPC domain profile profile. 138 277 IPR005175 -
Lele49g0568 393 MobiDBLite consensus disorder prediction 1 101 - -
Lele49g0568 393 CDD DUF296 142 233 IPR005175 -
Lele49g0568 393 SUPERFAMILY AF0104/ALDC/Ptd012-like 140 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0568 Lele-ChrLele49 3434531 3438235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0568 11 316 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 62.080 8.56e-122 355