Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0530 ATGCGTATCCCATCTCCCCTCAACACAACTCTAGATTATAATTTTCTTTCAGGCAGCCAGCAGGAATCTCTAGTGAAGTGGATAAATAGTGTGCTTCCTCACTTAAATTTACCCATAGAAACTTCAGAGGAGGAACTAAGGGCATTGCTGAGGGATGGATCTGTATTATGCAGCATTTTGGAAAAGCTGATTCCCGGTTCAGTGGGATTAGGAGGTTATTCTTTGGATGAGCAAGTAAACATTAGAAGGTTTCTACAGGCTATGAATGAGCTGGGATTGCCTGGATTTGATTTGTCAAGGCTAGAGCAGGTATGGAACACTGGGACTCTTTGTTCATGCTTGATTGGAGGTTTGGTTAAAGAATACCTGGCTATAGGTGCTCTTGCCACACATAAAGGAAATCCGATGTACAATTTAGAAGTAAAATTGACTATTTTACCACTGGAACTTGGGAGGATGATAGTAATTCCTTTACATTTCTCTCTTGATGATGAAACAATACTCTTGGGATCGATAGGACCTGGATTGCAGTACCTTGAGGCTCTGAAAACTCATTTTGCTTCAAATGTTGAGAGAGAAAATATCCAAAGCCTTTCCAGAAAGAGGTGGGATAAATCAGATATAGCATACTGGGCCTATGGAAGTGAAGAGAGGCTAAAATTTTCAGGTGATTCAAATTTTGAACATGAAGTTGAGGGCTCTGTCCTATCAGATGAAGCTACTCTAACACATCATGTTGGATCTAAGTCTAAAGAACTCTTACAGTCGAAACGAGGATTGCATGTGGATCTTTCTGATAATAAGATTATGGAGTTACTCAAATCAAACAGTTTAGATGTAAGCCAAAGAGCTACTTGTCCATGCCTATGTTCCCTCTGCATTAGTTTTTCACCCCTGCAGAGTGCTTCGACTCAATCACTTTTTAACATAGGAAATAGGATTATGGACGATATCTTTGGAAGAAGGAATGGAGATGTGCCTCAACATGCAGCATTCCTGTTGAGAAAAATTCTTGAAGTGATAGAGTGGCGCTTTTCTAACCAAGCAGAAAGCCTGAAAAATCAAAACAGTCTATTCAAGGTTCGTGAGGGGAAGTACCAATTGAAAATAAATGCACTTGAAACCCTGGCAGCAGGGACAAATGAAGAGAATGAGTTTGCTCTTCAAGTTGAGAAAACTAAAATGGAGGAGAAAAACAGACTTGATGAGCAGGATGTTGCTCGTTTAAAACAAGAAAAAGTTCGGGGTGAAATTGAGATTTCTGCATTGAAGCAAGAATTGGAAATGGTCAAAAAAGCACATGAAGAGCTCCGTATACAGTCAGAATTACGTGCTGAAGAGTGCAAGTCAGGATACGAGAAGAGGATACGGGAACTAGAACGTGGTCTCTCTGATGCAAGGAATCAAGCCAAGAAATTGGAGGCACTTATAGAATCAAAATCTCTTAAATGGAAGAACAAAGAGAATACCTATCAAAGTTTCATTAATTACCAATCTGGAGCATTCAAGGAATTGAAAGTGGCGATGGAATCTGTAAAAGACGATGTGCTAAAAACAAAAAGAAGCTACTCAGAAGAATTCAAGTATTTGGGGATGAAGCTCAAAAGTCTCGCTGAAGCTGCTGAAAATTATCATGTAGTTCTTACAGAAAATCGGAAATTATATAACGAAGTTCAAGATTTAAAAGGAAATATCCGGGTATATTGTCGAATAAGACCCTTTCTTCCCGGGCAAAGTCAAAGCCAGACAACCATTGAATTGATTGGTGATAATGGAGAATTAGTTGTCAGCAATCCTCTCAAACAAGGAAAAGATAGTCGTAAACTTTTCAAATTTAACAAGGTTTTTGGTCCTACAACAAGTCAAGAAGAAGTATTCCTGGATACTCAACCACTAATTCGTTCTGTACTTGATGGGTACAATGTTTGCATATTTGCGTATGGTCAAACTGGCTCAGGAAAGACATATACAATGAGTGGACCTAGTCTTTCATCAAAATCAGATTGGGGAAAGTATTATTTCCTTGACTTGCATACACTTGGGATTTTGAATTCTGCCCAACCAAATGGGTTGGTTGTTCCTGATGCAAGCTTGCATACCGTGAATTCTATGACGGATGTGTTGGAGTTGATGAACATTGGACTAACGAATCGGGCAACTGGTTCCACAGCCTTAAATGAAAGAAGTAGCAGATCACATAGTGTTCTTACTGTTCATGTTCGTGGCACGGATTTGGAGACCAACACTTTATTGCGTGGATGTCTACATCTTGTAGATCTTGCAGGGAGTGAGAGAGTAGAGCGTTCTGAAGCAACAGGAGATAGGCTTAAGGAGGCACAACATATAAATAAATCACTATCAGCACTTGGAGATGTGATTTTTGCTCTAGCACAAAAGAGTTCACATGTTCCTTATAGAAATAGTAAATTGACCCAACTTCTTCAAAGTTCGATAGGTGGTCAAGCAAAAACCCTCATGTTTGTACAGCTTAACCCTGACACTGCTTCATATTCTGAAACGATAAGCACCTTGAAGTTTGCCGTGAGGGTTTCAGGTGTGGAGCTAGGTGCTGCTCGTAGTAATAGAGAGGGAAGGGATGTCAAAGAACTCTTAGAGCAGGTGGCATCTCTCAAAGATGCACTTGCAAGGAAGGATGAAGAGATTGAGCGGTTGCATCAGCTCCAGCCTAATCTCAATGTTGCCAAGCGTGAGATGATGAGGTATGGGTCATTATCTCCAAGGAGACATTCCACTGGAACTTCGAGGCATGGCACAAGACTTTCTACGGCTGTGGCCTTGCGAGTTGGTGAAAACACAGCTTCTGACATGGACAACTGCTCAGAGTATAGTGATAAGCATTCAGAAGCTGGTTCTCATCAGTCAATGGATGATCTCAGGATCAATCCCACTTCCCCACTATTCAAATCATCCAAAGAAGATACTAGTCAGAATGTCAATGACGACATTGATCTCTTAGGATTTGGAGATGCAGATTCTGAAGAGAGATTAAGTGATATATCTGACGGTGGTCTTTCAATGGGAACAGAAACTGATGGTTCTATCTGCAGCATTGTGGAGTACACTCTTTTCCCTGAAGAGGAGAAACCATCTGAAATTACCCCAAGTAAGAGCACAACAACAGACAACCGGTCAGCTGTAAACAAAGAGAAATCCACTTTGGCTTCCAAAATTCCCAAAGTCGCAGAAGTTCTACAAAAAGCACCAGTAAAATTTTCCAAGTTATCAATGAACAGAAGTTCCTCAAAGGTTTCCTCAAGCGTCAAGAAAACCACTGCCGGTAGCTCAACTTCAGTGAAGGCCCCTCCTAAACGATGGCAATAA 3342 0.4069 MRIPSPLNTTLDYNFLSGSQQESLVKWINSVLPHLNLPIETSEEELRALLRDGSVLCSILEKLIPGSVGLGGYSLDEQVNIRRFLQAMNELGLPGFDLSRLEQVWNTGTLCSCLIGGLVKEYLAIGALATHKGNPMYNLEVKLTILPLELGRMIVIPLHFSLDDETILLGSIGPGLQYLEALKTHFASNVERENIQSLSRKRWDKSDIAYWAYGSEERLKFSGDSNFEHEVEGSVLSDEATLTHHVGSKSKELLQSKRGLHVDLSDNKIMELLKSNSLDVSQRATCPCLCSLCISFSPLQSASTQSLFNIGNRIMDDIFGRRNGDVPQHAAFLLRKILEVIEWRFSNQAESLKNQNSLFKVREGKYQLKINALETLAAGTNEENEFALQVEKTKMEEKNRLDEQDVARLKQEKVRGEIEISALKQELEMVKKAHEELRIQSELRAEECKSGYEKRIRELERGLSDARNQAKKLEALIESKSLKWKNKENTYQSFINYQSGAFKELKVAMESVKDDVLKTKRSYSEEFKYLGMKLKSLAEAAENYHVVLTENRKLYNEVQDLKGNIRVYCRIRPFLPGQSQSQTTIELIGDNGELVVSNPLKQGKDSRKLFKFNKVFGPTTSQEEVFLDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPSLSSKSDWGKYYFLDLHTLGILNSAQPNGLVVPDASLHTVNSMTDVLELMNIGLTNRATGSTALNERSSRSHSVLTVHVRGTDLETNTLLRGCLHLVDLAGSERVERSEATGDRLKEAQHINKSLSALGDVIFALAQKSSHVPYRNSKLTQLLQSSIGGQAKTLMFVQLNPDTASYSETISTLKFAVRVSGVELGAARSNREGRDVKELLEQVASLKDALARKDEEIERLHQLQPNLNVAKREMMRYGSLSPRRHSTGTSRHGTRLSTAVALRVGENTASDMDNCSEYSDKHSEAGSHQSMDDLRINPTSPLFKSSKEDTSQNVNDDIDLLGFGDADSEERLSDISDGGLSMGTETDGSICSIVEYTLFPEEEKPSEITPSKSTTTDNRSAVNKEKSTLASKIPKVAEVLQKAPVKFSKLSMNRSSSKVSSSVKKTTAGSSTSVKAPPKRWQ 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0530 1113 Gene3D Kinesin motor domain 506 681 IPR036961 -
Lele49g0530 1113 PRINTS Kinesin heavy chain signature 754 772 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele49g0530 1113 PRINTS Kinesin heavy chain signature 803 824 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele49g0530 1113 PRINTS Kinesin heavy chain signature 723 740 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele49g0530 1113 PRINTS Kinesin heavy chain signature 639 660 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele49g0530 1113 FunFam Kinesin-related protein3 690 895 - -
Lele49g0530 1113 Gene3D - 16 116 IPR036872 -
Lele49g0530 1113 MobiDBLite consensus disorder prediction 941 965 - -
Lele49g0530 1113 MobiDBLite consensus disorder prediction 1082 1113 - -
Lele49g0530 1113 Pfam Microtubule binding 549 664 IPR031852 GO:0008017
Lele49g0530 1113 ProSiteProfiles Kinesin motor domain profile. 564 853 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele49g0530 1113 Pfam Calponin homology (CH) domain 19 106 IPR001715 GO:0005515
Lele49g0530 1113 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 564 891 IPR027417 -
Lele49g0530 1113 MobiDBLite consensus disorder prediction 1034 1059 - -
Lele49g0530 1113 Pfam Kinesin motor domain 687 851 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele49g0530 1113 Coils Coil 449 483 - -
Lele49g0530 1113 Coils Coil 392 440 - -
Lele49g0530 1113 ProSiteProfiles Calponin homology (CH) domain profile. 18 121 IPR001715 GO:0005515
Lele49g0530 1113 PANTHER KINESIN-LIKE PROTEIN KLP-3 25 437 - -
Lele49g0530 1113 SUPERFAMILY Calponin-homology domain, CH-domain 20 114 IPR036872 -
Lele49g0530 1113 Gene3D Kinesin motor domain 682 894 IPR036961 -
Lele49g0530 1113 SMART kinesin_4 562 861 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele49g0530 1113 Coils Coil 867 894 - -
Lele49g0530 1113 SMART ch_5 20 117 IPR001715 GO:0005515
Lele49g0530 1113 MobiDBLite consensus disorder prediction 946 960 - -
Lele49g0530 1113 MobiDBLite consensus disorder prediction 1040 1058 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0530 Lele-ChrLele49 3164477 3171907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0530 444 887 Calmodulin-binding Proteins AT5G65930 35.343 5.50e-66 242